Rhodanobacter thiooxydans: LRK53_04420
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Entry
LRK53_04420 CDS
T08065
Name
(GenBank) polysaccharide biosynthesis protein
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.115
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00541
Biosynthesis of various nucleotide sugars
rth01100
Metabolic pathways
rth01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LRK53_04420
Enzymes [BR:
rth01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
LRK53_04420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
Polysacc_syn_2C
3Beta_HSD
GDP_Man_Dehyd
NAD_binding_10
NmrA
RmlD_sub_bind
NAD_binding_4
KR
F420_oxidored
adh_short
Sacchrp_dh_NADP
NAD_Gly3P_dh_N
Shikimate_DH
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
UJJ55648
LinkDB
All DBs
Position
complement(1027474..1028490)
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AA seq
338 aa
AA seq
DB search
MESAFDGKTLLITGGTGSFGNAVLSRFLDTSIKEIRVFSRDEKKQDDMRVALQNDKVKFY
LGDVRDYGSIYDALKGVDYVFHAAALKQVPSCEFYPLEAVKTNVLGTENVINASIELGIS
RVVVLSTDKAVYPINAMGMSKALAEKIVVAKSRNCDPSQTVLCATRYGNVMASRGSVIPL
FVAQLLDGKPLTITDPNMTRFLMSLQDSVDLVLHAFDHAHPGDIFVQKSPASTVAMLAEA
LKQMLARDNEIRIIGTRHGEKLFETLVSREEMVRAEDRGRYYRIPADARDLNYKQYFEEG
ELEISTIDDYTSHNTERLDVEGIKRVVGQLGTLEKLRA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggaatccgcattcgacggaaagactctgctcattaccggcggcactggctcgttcggc
aatgctgtcctgtctcgctttcttgacaccagcatcaaggaaataagggtattcagccgc
gatgagaagaagcaggatgacatgcgcgtcgcccttcagaatgataaggtcaagttctac
ctcggtgacgtgcgcgactacggaagcatctacgacgcactgaagggcgtcgactacgtt
tttcatgcggccgcgctcaagcaggtgccctcatgcgagttctatccgcttgaggcagtc
aaaaccaatgtgctcggcactgaaaacgttatcaacgcgtcgatcgagcttggcatatcc
cgtgtcgtcgtgctcagcaccgacaaagcggtctatccaatcaatgccatgggcatgtcc
aaggccttggcggaaaaaatcgttgttgcaaaatcccgcaattgtgatcccagccagacg
gtcttgtgtgccactcggtacggtaacgtcatggcctcacgcggttcagtgatcccactg
ttcgtggcacaactgctcgacggcaagccgctcaccattaccgacccgaacatgacgcgc
ttcctgatgtcactgcaggattccgttgaccttgttttgcacgcatttgatcacgctcat
ccgggcgacatctttgtgcagaaatctcccgcttccaccgtcgcgatgctagcggaggcg
ctcaagcagatgcttgcccgggacaacgagatccgaatcatcggaacgcgccacggcgag
aagctattcgagacactcgtgtctcgtgaagagatggttcgtgccgaggatcgtggccgt
tactaccgtattccggccgatgcccgtgacttgaactacaagcagtattttgaggaaggg
gaacttgagatttcgacgattgacgactacacctcgcacaacaccgagcgcctcgacgtg
gaagggatcaagcgagtagtcgggcagctgggcacgctggagaagcttcgtgcttaa
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