Rhodanobacter thiooxydans: LRK53_07935
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Entry
LRK53_07935 CDS
T08065
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth01501
beta-Lactam resistance
rth01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LRK53_07935
01503 Cationic antimicrobial peptide (CAMP) resistance
LRK53_07935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rth02000
]
LRK53_07935
01504 Antimicrobial resistance genes [BR:
rth01504
]
LRK53_07935
Transporters [BR:
rth02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LRK53_07935
Antimicrobial resistance genes [BR:
rth01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LRK53_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
GPI2
FixP_N
Motif
Other DBs
NCBI-ProteinID:
UJJ56288
LinkDB
All DBs
Position
complement(1775051..1778299)
Genome browser
AA seq
1082 aa
AA seq
DB search
MPSFFIDRPIFAWVVAILIALGGVLSILNLGVESYPSVAPPSVVVNAVYPGASADTTEKN
VTQVIEQQLTGIDHLLYFSSSSSSSGRASITLTFENGTNPDIAQVQVQNKVSLATPRLPS
EVTKQGVVVAKANTGFLEVVALRSDNPAIDRARLNDIVASQVLDQIARVPGVGSTQQFGG
EYAMRIWLDPDKLQGYGLSASQALAAVTAQNVQFAAGSLGSDPAANGQGISVTVATEGRF
TTPEQFENIILRANNDGTTVKLGDVAWVSFGAGVYGFNTTYNGLPVAAFAIQLLPGANAL
DVATAVHGKMDELAGSFPQGVSWFTPYDSTTFVKVSVNEVVHTLIEAIVLVFLVMLIFLQ
NIRATIIPTLVIPVALLGTFIGMLLLGFTINQLTLFGMVLAIGIVVDDAIVVIENVERIM
TEDGLSPKEATKKAMGQITGAVVGITVVLIAVFVPSSFQPGAAGVIYKQFALTIAMSVAF
SAFLALSFTPALCASFLTPVHEEKKNFVFRWFNTAFGKITHTYTGHIGSAVRHAPRWVMV
FVLISVLTGFLYTRLPGSFLPEEDQGFALAVVQLPPGASLQRTNAVMRQILTVLKQDPAV
DGVVQIAGFSFLGMGENVGMSFIRLKPWGERGWAPDQKAAQEQHDKLVKEGKAKPIDLGV
TAAEFIQRANGAVQSVRDAQIFIVNVPTVQGLGQFGGFDMYLQDRGGTGRDALTAARNTL
LGAASQNPLLVGVRPNGLEDAPQLRLDVDRTQALSMGLSVGDIYNAISLMLAPVYVNDFS
YGGRVKRVIMQADSPHRMGPEAFQHIFTPSTRTNADGTPQMIPLSNVVQAKWQMASPSLV
RYNGYSAVEIVGSPAPGHASGEAMNIMQKIVSDDLPHGFGYDWTGQSYQEILSGNTAILL
MVLSVVIVFLCLTALYESWSIPVSVLLVVPLGILGAVVFTLLRGLPDDIYFKIGVITVMG
LAAKNAILIVEFAVIEQRQGRTLREAVVDAARLRLRPILMTSIAFIGGVFPLFVSTGAGA
NARHAIGTGVIGGMLFATFLGVLLIPVFYVVVRRLLGDKLDGHEHPAIQGPHTFDSDPRR
GQ
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtttcttcatcgaccgcccgatcttcgcgtgggtggtagccatcctgatcgcg
ctgggcggcgtactgtccatcctcaacctgggcgtggagtcatacccttcggtcgccccg
ccgtcggtcgtggtcaacgccgtctacccgggcgccagcgcggataccaccgagaagaac
gtcacccaggtgatcgagcaacagctgaccggcatcgatcacctgctgtacttcagctcc
tcgtccagttccagcggccgcgccagcatcacgctgaccttcgagaacggcaccaacccg
gacatcgcccaggtgcaggtgcagaacaaggtttcgctggctacgccgcgcctgccctcc
gaggtgaccaagcagggtgtggtggtggccaaggccaacaccggcttcctcgaggtggtc
gcgctgcgttcggacaacccggcgatcgaccgcgcccgcctcaacgacatcgtggcgtcg
caggtgctcgaccagatcgcgcgcgtgcccggcgtcggcagcacccagcagttcggcggc
gaatacgccatgcgcatctggctggacccggacaagctgcagggctacggcctgtcggcc
agccaggcgctggccgcggtcaccgcgcagaacgtgcagttcgcggccggctcgctgggt
tccgacccggcggcgaacggccagggcatcagcgtcaccgtggctaccgagggccgcttc
accacgccagagcagttcgagaacatcatcctgcgcgccaacaacgacggcaccacggtc
aagctcggcgacgtggcctgggtcagcttcggcgccggcgtgtacggcttcaacaccacc
tacaacggcttgccggtggcggcgttcgcgatccagctactgcccggcgccaacgcgctg
gacgtggccaccgcggtgcacggcaagatggacgagctggcaggcagcttcccgcagggc
gtcagctggttcactccgtacgactcgaccaccttcgtcaaggtgtcggtcaacgaggtg
gtgcatacgctgatcgaggcgatcgtcctcgtgttcctggtgatgctgatcttcctgcag
aacatccgcgccaccatcattcccaccctggtgatcccggtggccctgctcggcaccttc
atcggcatgctgctgctcggcttcaccatcaaccagctgaccctgttcggcatggtgctg
gcgatcggcatcgtggtcgacgacgcgatcgtggtgatcgagaacgtcgaacgcatcatg
accgaggatggcctgtcgccgaaggaggccaccaagaaggcaatgggccagatcaccggc
gccgtggtcggcatcaccgtggtgctgatcgcggtgttcgtgccgtcgtcattccagccg
ggtgccgcgggcgtgatctacaagcagttcgcgctgaccatcgcgatgtcggtggcgttc
tccgccttcctcgcgctgtcgttcacgccggcgctgtgcgccagcttcctgacgccggtc
cacgaagagaagaaaaacttcgtgttccgctggttcaacaccgcgttcgggaagatcacc
cacacctacaccggccacatcggcagcgccgtgcgccacgcgccgcgctgggtgatggtg
ttcgtgctgatcagcgtgctgaccggctttctgtacacccgcctgcccggcagctttctg
cccgaggaggaccagggcttcgcgttggcggtcgtgcagctgccgcccggtgccagtctg
caacgtaccaacgcggtcatgaggcagatactcaccgtgttgaagcaggaccccgccgtc
gatggcgtcgtccagatcgcgggcttcagcttcctcggcatgggcgaaaacgtgggcatg
tccttcatccggctcaaaccctggggtgagcgtggctgggcgccggatcaaaaggcggca
caggagcaacacgacaagctggtcaaggagggcaaggccaagccgatcgacctgggcgtc
accgccgcggaattcatccagcgcgcgaacggggccgtgcaatcggtgcgcgacgcgcag
atcttcatcgtcaacgtgccgacggtgcagggcctgggccagttcggcggcttcgacatg
tacctgcaggaccgcggcggcaccgggcgtgatgcgctcaccgctgcccgcaacaccctg
cttggtgcggccagccagaatccgctgctggtcggcgtgcgcccgaacgggctggaggac
gcgccgcaactgcgccttgacgtcgaccgtacccaggcactgtcgatgggactgtcagtg
ggcgacatctacaacgcgatcagcctcatgctggcgccggtgtacgtcaacgacttctcc
tacggcggtcgcgtcaagcgcgtgatcatgcaggccgactcgccccaccggatgggcccg
gaggcattccagcacatcttcacgcccagcacgcggaccaatgccgacggcaccccgcag
atgatcccgctgtccaacgtggtgcaggcgaagtggcagatggcgtcgccatcgctggtc
cgctacaacggctactcggcggtcgagatcgtcggctcgccggcgccgggtcacgcctcg
ggcgaggcgatgaacatcatgcagaaaatcgtcagcgacgacctgccccacggcttcggc
tatgactggaccggccagtcgtaccaggaaatcctctccggcaacacggcgatcctgctg
atggtgctgtcggtggtgatcgtgttcctgtgcctgaccgcgctgtacgagagctggtcg
atcccggtatcggtgctgctggtggtgccgctgggcatcctcggcgcggtggtgttcacc
ctgctgcgcggcctccccgatgacatctatttcaagatcggcgtgatcacggtgatgggc
ctggccgcgaagaacgcaatcctgatcgtggaattcgcggtgatcgagcagcgccaggga
cgcaccttgcgcgaagccgtggtggacgcggcccggctgcgactgcggccgatcctgatg
acctcgatcgcgttcatcggcggcgtgttcccgctgttcgtctccaccggcgccggcgcc
aacgcgcgccatgcgatcggcaccggcgtgatcggcggcatgctgttcgccaccttcctc
ggcgtactgctgatcccggtgttctacgtggtggtgcgccggctgctcggcgacaagctg
gacggccacgagcatccggccatccaggggccgcacacgttcgactctgatccgcgacgc
gggcagtga
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