Rhodanobacter thiooxydans: LRK53_07940
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Entry
LRK53_07940 CDS
T08065
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth01501
beta-Lactam resistance
rth01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LRK53_07940
01503 Cationic antimicrobial peptide (CAMP) resistance
LRK53_07940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rth03036
]
LRK53_07940
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rth02000
]
LRK53_07940
01504 Antimicrobial resistance genes [BR:
rth01504
]
LRK53_07940
Chromosome and associated proteins [BR:
rth03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LRK53_07940
Transporters [BR:
rth02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LRK53_07940
Antimicrobial resistance genes [BR:
rth01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LRK53_07940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
INPP5B_PH
DUF6799
Motif
Other DBs
NCBI-ProteinID:
UJJ56289
LinkDB
All DBs
Position
complement(1778312..1779505)
Genome browser
AA seq
397 aa
AA seq
DB search
MKSSSLSTPLLCLSLLALAACGKGKEQGPPQKMPPPEVGVIQVQPQNSPLTRNLVGRLSA
YRSADVRARVAGVLLKRAYSEGTNVKQGQLLFQIDPAPLKATLNAAQASLAQAQATWTNN
KITAARVHELAPKGYVSRSDLDNALAAERTAAAAVQAAQANVQTARINLGYASVSAPIAG
RAGQQQVTEGALVGNGEATLLTTVDQVDPMYVNFTMSVDSMDQMRRAQSSGNVTLTEQDK
ASVQIALPDGSAYGEPGVLDFSDIAVNPATGAVNLRAVVPNPKHSLLPGMYVTLKANLGQ
QHNVFIVPQQAVQRDTGGTYVMTIGKDGNVKRKSVTTTDMRDGNWVVSDGLAAGDQIIVS
GLQKVKDGAPAKSTPWKPATTNGSVTASAPGAAPNAK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcctcatcactgagcacacccttgctgtgcctgagcctgttggcgctggccgcc
tgcggcaaaggcaaggaacaggggccgccgcaaaaaatgccgccgccggaagtcggcgtg
atccaggtgcagccacaaaactcgccgctgaccaggaacctggtcggccggctgtcggcc
tatcgcagcgccgacgtgcgcgcccgcgtggccggcgtgctgctcaagcgcgcgtacagc
gaaggcaccaacgtcaagcagggccagctactgttccagatcgacccggccccgctgaag
gccacgctgaacgctgcccaggcctcactggcgcaggcccaggccacctggaccaacaac
aagatcaccgccgcgcgcgtgcacgagctggcgcccaagggctacgtgtccaggtcggat
ctggacaacgccctggccgccgagcgcaccgccgccgccgccgtgcaggccgcgcaggcg
aacgtgcagaccgcgcgcatcaacctcggctacgccagcgtcagtgcgccgatcgccggt
cgtgccggccagcagcaggtcaccgagggcgcgctggtcggcaatggcgaggccacgttg
ctcaccacggtcgatcaggtcgacccgatgtacgtgaacttcaccatgagcgtggattca
atggatcagatgcgccgcgcgcagagcagcggcaacgtcaccctgaccgaacaggacaag
gccagcgtgcagatcgccctgcccgacggcagcgcctatggcgaaccgggcgtgctggac
ttctccgacatcgcggtcaacccggccaccggcgcggtcaacctgcgcgcggtggtgccg
aacccgaaacacagcctgctgccgggcatgtacgtgacgctgaaggccaacctcggccag
cagcacaacgtgttcattgttccgcagcaggcggtgcagcgcgacaccggcggcacctat
gtgatgacgatcggcaaggacggcaacgtcaagcgcaagagcgtcaccaccaccgacatg
cgcgacggcaactgggtcgtcagcgacggcctcgccgccggcgaccagatcatcgtgtcc
ggattgcagaaagtgaaggacggcgcgccggccaagtccactccgtggaagccggcgacc
accaacggatccgtcaccgccagtgctccgggcgccgccccgaacgccaagtaa
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