Rhodanobacter thiooxydans: LRK53_07945
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Entry
LRK53_07945 CDS
T08065
Name
(GenBank) NAD-glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00220
Arginine biosynthesis
rth00250
Alanine, aspartate and glutamate metabolism
rth00430
Taurine and hypotaurine metabolism
rth00910
Nitrogen metabolism
rth01100
Metabolic pathways
rth01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
LRK53_07945
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LRK53_07945
00220 Arginine biosynthesis
LRK53_07945
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
LRK53_07945
Enzymes [BR:
rth01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
LRK53_07945
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_HM3
GDH_ACT1
GDH_ACT2
GDH_HM1
GDH_ACT3
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
UJJ56290
LinkDB
All DBs
Position
1780022..1784947
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AA seq
1641 aa
AA seq
DB search
MNATPAANDPSLSSVVFAELKRGGFSPERLSEAQVFCEAFFARVGGGDAHLHTPVQWAAL
VGSLLEFMQKRREGQACVRVLSPADVQAGRSLLQIVTDDMPFLVDTVSMVVSAKLQIHVV
IHPALKVARDASGKLLGLGGAAGSAESLMHFEIDRVADAAEQAQLEGQVAAALEDVRAAV
GDWSAMRDKALAVANQLPQRKLPLDTASVQEASEFMRWIAADNFTFLGYREYEVADADGD
RVLRAVESSGLGILRSNERSMAPRSLSTLAASELPQSGAIDAIILTKTNARSRVHRTGYM
DYIGVLQFGADGRAVAEQRFLGLFSSNAYMARPQDVPLVRHKAEAVLARSGLKRDSYSGR
SLRHILETLPREELFQSTEDELFATAMGILELRQRARTRLFMRRDRYGRFFTCMVFVPRD
RFNTSVRERIESLLRTALHAEQSDSSVQMGEAVLARLTIVLRPKIGDHPSYDLAELEQGV
ASIVRNWHDEVRDALVRLRGEHEGVVLANRYARALPAGYIEDVSPAVAAEDVYQLSQLVG
DNALRMSFYHPPKAPETLRFKVYRSGGDIALSEVLPQLENLGLRVLTEHVYEVSGEAPLS
IQDFEVQPVGKLTFGVEQVGALFEDAFEQIWRGNAENDGFNRLVLGAKLSWRQVAMLRGY
CKYLLQTGATFSQSYMEETLNRYPAIAGLLVELFLAKFDPRREALSADELQAAGATLAAE
MLALIPGNVQAAQPGLIGELAGSLSKPRDEQVQAVESLVGILLENVASLDEDRILRGFVK
LIRATLRTSFFQQWDGAYRDYISYKLDSHAVPGLPKPVPYREIWVCAPRVEGIHLRFGAV
ARGGLRWSDRREDFRTEVLGLVKAQMVKNTVIVPVGSKGGFFVKKSPAASDRDAVLAEGI
ACYRLFINGLLDVTDNLVDGKVVHPHDVVRHDADDPYLVVAADKGTAKFSDIANAISIEH
NYWLGDAFASGGSHGYDHKGMGITARGAWESVKRHFRALGRDCQTQDFTCVGIGDMSGDV
FGNGMLLSEHTLLVAAFDHRHVFLDPNPDAARSFVERKRMFDVPRSSWDDYDKSLISAGG
GIYPRSAKSIPLSPEMRAVLGLKPEVEQLAPSDLLSAILKAPVDLIFNGGIGTYIKSSGE
THAEVSDRANNALRINGADVRAKIIGEGGNLGMTQKGRIEAAQHGVLLNTDFIDNSAGVD
TSDHEVNIKILLNDAVQRGELGFDARNAQLAAMTDEVAQLVLWDNYRQNQAITLMEHQSV
HRIGSMAHFIRTLEAEGTLDRQVENLPGEAELTERKSRGLGLTRPELAVLLSYDKIRLFQ
QLLDSDVPEDPYLSKELVRYFPLPLHETYAAHMQRHRLKREIIATAVTNSTINRMGATFM
MRMQEDTGQGPAAIAKAYTAAREILEARELWAEIEALDAKVAEDTQIDAIKQIWSLLRHM
TRWLLNRPGGSLDIAANVERYQAGVSALRKALPEVLTATGKGDFSSSQEKWEGLGLPAEL
ALRMARLPELRAALDMVEVSQQSGQSIEKVAGVFFELGEALDLEWLRDQIEALPVEGHWH
AQARGSLLDELNHQHRALALQVLSLGGGSRDISPVQAWLQRDDATLQYTRGMLAEILTQN
ADYPIASVAVRRLAQLAQVPV
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgacccctgcagcgaacgacccttccctttcgtcagtagtattcgccgagctg
aaaaggggcggtttttcgcccgagcgcctgagtgaagcgcaggttttctgcgaggctttc
tttgcacgggtcgggggcggcgacgcgcatctgcacacaccggtgcaatgggcggcgctg
gtcggcagcttgctggagttcatgcagaagcgccgtgaaggccaggcctgcgtgcgcgtg
ctcagtccggcggacgtgcaggctggccgcagcctgctgcagatcgtcaccgacgacatg
ccgttcctggtcgacacggtcagcatggtcgtctcggcgaagctgcagatccatgtggtg
atccacccggcgctgaaggtggcgcgcgacgcttccggcaagctgctcggccttggcggc
gccgccggcagcgccgaatcgctgatgcatttcgagatcgaccgggtggctgatgccgcc
gaacaggcgcagctggaagggcaggttgccgccgcgctggaagacgtgcgtgccgcggtg
ggcgactggtcggcgatgcgcgacaaggcgctggcggtggccaaccaactgccgcagcgc
aagctgccgctggataccgcctcggtgcaggaagccagcgagttcatgcgctggatcgcc
gccgacaacttcaccttcctcggctaccgcgaatacgaagtcgccgacgccgacggcgac
cgcgtgctgcgggcggtcgaatcgtccggcctgggcatcttgcgcagcaacgaacgctcg
atggcgccgcgctcgctgagcacgctggccgccagcgagctgccgcaatcgggcgccatc
gacgcgatcatcctgaccaaaaccaacgcgcgctcgcgcgtgcaccgcaccggctacatg
gattacatcggcgtgctgcagttcggcgccgacggccgtgcggtggccgaacagcgcttc
ctcggcctgttctcctccaacgcctacatggcccgcccgcaggacgtgccgctggtgcgg
cacaaggcggaagcggtgctggcgcgctcgggcctcaagcgcgactcgtactccggcagg
tcgctgcgccacatcctggaaaccctgccgcgcgaggaactgttccagagcaccgaggac
gagttgttcgccaccgcgatgggcatcctcgaactgcgccagcgcgcgcgcacgcggctg
ttcatgcgccgcgaccgctacggccgtttcttcacctgcatggtgttcgtgccgcgcgac
cgcttcaacacctcggtgcgcgagcgtatcgagtcgctgctgcgcacggcgctgcacgcc
gagcagagcgattcctcggtgcagatgggcgaggccgtgctggcgcggctgaccatcgtg
ctgcggccgaagatcggcgaccacccgtcctacgacctggccgagctggagcagggcgtg
gccagcatcgtgcgcaactggcacgacgaggtgcgcgacgcgctggtgcgcctgcgcggc
gagcacgagggcgtggtgctggccaaccgctacgcgcgcgcgctgccggccggctacatc
gaggacgtcagccccgcggtggccgccgaggacgtgtaccagctctcgcagctggtcggc
gacaacgcgctgcggatgtcgttctaccacccgccgaaggcgcccgagacgctgcgcttc
aaggtctaccgctccggtggcgacatcgcgttgtccgaagtgctgccgcagctggagaac
ctcggcctgcgcgtgctcaccgagcatgtctacgaggtttccggcgaggcgccgctgtcg
atccaggacttcgaggtgcagccggtcggcaagctcaccttcggcgtggagcaggtcggt
gcgctgttcgaggacgccttcgagcagatctggcgcggcaacgccgaaaacgacggcttc
aaccggctggtgctcggcgccaagctgagctggcgtcaggtggcgatgctgcgcggctac
tgcaagtacctgctgcagaccggcgccaccttctcgcagtcgtacatggaggaaactctg
aaccgctatccggcgatcgccgggctgctggtggagctgttcctggccaagttcgatccg
cgccgcgaggcgctttccgccgacgaattgcaggccgccggtgcgaccctcgccgccgag
atgctggcgctgatcccgggcaacgtgcaggccgcgcagccgggcctgatcggcgagctg
gccgggtcgctgtcgaagccgcgcgacgagcaggtccaggcggtggagagcttggtcggc
atcctactggagaacgtggccagcctcgacgaggaccgcatcctgcgcggcttcgtgaag
ctgatccgcgccaccttgcgcaccagcttcttccagcagtgggacggcgcgtaccgcgac
tacatcagctacaagctcgactcgcatgccgtgcccggcctgcccaagccggtgccgtac
cgcgagatctgggtgtgcgcgccgcgcgtcgagggcattcacctgcgcttcggcgcggtg
gcgcgcggcggcctgcgctggtccgaccgccgcgaggatttccgcaccgaggtgctgggc
ctggtcaaggcgcagatggtgaagaacacggtgatcgtgccggtcggttccaagggcggc
ttcttcgtcaagaagtccccggccgccagcgatcgcgacgcggtactggccgagggcatc
gcctgctaccgcctgttcatcaacggcctgctcgacgtcaccgacaacctggtcgacggc
aaggtggtgcacccgcacgacgtggtgcgccacgacgcggacgacccctacctggtggtg
gctgccgacaagggcaccgccaagttctccgacattgccaacgcgatctcgatcgagcac
aactactggctcggcgacgcattcgcctccggcggctcgcacggctacgaccacaagggc
atgggcatcactgcccgtggcgcgtgggagtcggtgaagcgtcatttccgcgcgctcggc
cgcgattgccagacgcaggacttcacctgcgtgggcatcggcgacatgtccggcgacgtg
ttcggcaacggcatgctgctgtccgagcacaccctgctggtggccgcgttcgaccatcgc
cacgtgttcctcgacccgaacccggatgcggcccgctcgttcgtcgagcgcaagcgcatg
ttcgacgtgccgcgctcgagctgggacgactacgacaaatcgctgatctccgccggtggc
ggcatctacccgcgcagcgccaagtcgattccgctgtcgccggagatgcgcgcggtgctg
gggctcaaacccgaggtcgagcagctggcgccgagcgacctgctcagcgcgatccttaag
gcaccagtggacctgatcttcaacggcggcatcggcacctacatcaagtcgtccggtgaa
acgcacgccgaggtgagcgaccgtgccaacaacgcgctgcgcatcaacggcgccgacgtg
cgcgcgaagatcatcggcgagggcggcaacctgggcatgacccagaagggccgcatcgag
gcggcgcagcatggcgtgctgctgaacaccgacttcatcgacaactccgccggcgtggac
acctccgaccacgaggtgaacatcaagatcctgctcaacgacgccgtgcagcgcggcgag
ctcggcttcgacgcgcgcaacgcccagctcgccgcgatgaccgacgaggtggcccagctg
gtgctgtgggacaactaccggcagaaccaggcgatcaccctgatggagcaccagtcggtg
catcgcatcggctcgatggcgcacttcatccgcacgctggaggccgaaggcacgctcgac
cgtcaggtcgagaacctgcccggcgaggccgagctgaccgagcgcaagagccgtggcttg
ggcctgacccggccggagctggcggtgctgctgtcctacgacaagatccgcctgttccag
caattgctggactcggacgtgccggaggacccgtacctgtcgaaggagctggtgcgctac
ttcccgctgccgctgcacgaaacctacgccgcgcacatgcagcgccaccggttgaagcgc
gagatcatcgccaccgcggtgaccaactcgacgatcaaccgcatgggcgccaccttcatg
atgcgcatgcaggaagacaccgggcagggcccggcggcgatcgccaaggcgtacaccgcg
gcgcgcgagatcctcgaggcgcgcgagctgtgggccgagatcgaggcgctggacgccaag
gtcgccgaggacacccagatcgacgcgatcaagcagatctggtcgctgctgcggcacatg
acgcgctggctgctgaaccgccccggcggctcgctggacatcgccgccaacgtcgagcgc
taccaggccggcgtgtcggccctgcgcaaggcgctgccggaggtgctgacggcgaccggc
aagggcgatttctcctccagccaggagaagtgggaaggcctgggcctgccggcggagctg
gcgctgcggatggcccgcttgccggagctgcgcgccgcgctggacatggtcgaggtgagc
cagcagagcggccagtcgatcgagaaggtcgccggcgtgttcttcgaactgggcgaggcg
ctggacctggaatggctgcgcgaccagatcgaggcgctgccggtggaaggccactggcac
gcccaggcccgtggctcgctgctggacgagctcaaccaccagcaccgggcgctggcgctg
caggtgctcagcctcggcggcggcagcagggacatctcgccggtgcaggcatggctgcag
cgcgacgacgccaccttgcagtatacccgcggcatgctggcggaaatcctcacccagaat
gcggactacccgatcgcctcggtcgcggtgcgccggctggcgcaattggcgcaggtgccg
gtctga
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