Rhodanobacter thiooxydans: LRK53_09435
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Entry
LRK53_09435 CDS
T08065
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00020
Citrate cycle (TCA cycle)
rth00270
Cysteine and methionine metabolism
rth00620
Pyruvate metabolism
rth00630
Glyoxylate and dicarboxylate metabolism
rth00680
Methane metabolism
rth00710
Carbon fixation by Calvin cycle
rth00720
Other carbon fixation pathways
rth01100
Metabolic pathways
rth01110
Biosynthesis of secondary metabolites
rth01120
Microbial metabolism in diverse environments
rth01200
Carbon metabolism
Module
rth_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rth_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rth_M00012
Glyoxylate cycle
rth_M00168
CAM (Crassulacean acid metabolism), dark
rth_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LRK53_09435
00620 Pyruvate metabolism
LRK53_09435
00630 Glyoxylate and dicarboxylate metabolism
LRK53_09435
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
LRK53_09435
00720 Other carbon fixation pathways
LRK53_09435
00680 Methane metabolism
LRK53_09435
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LRK53_09435
Enzymes [BR:
rth01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
LRK53_09435
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
UJJ53230
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All DBs
Position
2115778..2116764
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AA seq
328 aa
AA seq
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MKAPVRVAVTGAAGQIGYALLFRIAAGDMLGSDQPVILHLLEITPALPALQGVVMELNDC
AFPTLAGVVATDDANVAFKDVDYALLVGARPRGPGMERKDLLEANGAIFGPQGKALNAHA
KRDVRVLVVGNPANTNALIAQQNAPDLDPKCFTAMVRLDHNRAKSQLAEKTSKHNTDVRK
MTIWGNHSSTQYPDLHHATVNGKPALSLVDQAWYESDFIPTVQQRGAAIIKARGASSAAS
AASAAIDHMRTWALGTEEGDWVSMGIPSDGSYGIAPGVIYGYPVTVKNGKYAIVQGLEIS
AFSRARMDATDKELREERAGVEHLFAKK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcccccgttcgagttgccgttaccggcgcagccggccagatcggctacgccctg
ctgttccgcatcgccgccggcgacatgctgggttccgaccagccggtgatcctgcatcta
ctggaaattaccccggcgctgcccgcgctgcagggcgtggtgatggagctgaacgactgt
gccttcccgaccctggccggcgtggtcgccaccgacgatgccaacgtcgcgttcaaggac
gtcgattacgcgctgctggtcggcgcccgtccgcgcggcccgggcatggagcgcaaggac
ctgctggaggcgaacggtgcgatcttcggcccgcagggcaaggcgctgaacgcgcacgcc
aagcgtgacgtgcgggtgctggtggttggcaacccggccaacaccaatgcgctgatcgcc
cagcagaacgcaccggacctggatccgaagtgcttcaccgcgatggtccgactcgaccac
aaccgcgccaagagccagctcgccgagaagaccagcaagcacaacaccgacgtgaggaag
atgacgatctggggcaaccacagctctacccagtatcctgacctgcatcacgccaccgtc
aacggcaagccggcgctgtcgctggtcgaccaggcctggtacgagagcgacttcattccc
accgtgcagcagcgcggcgcggcgatcatcaaggcgcgcggcgcttcctccgccgcctcg
gccgcgtcggccgcgatcgaccacatgcgcacctgggcgctgggcacggaagagggcgac
tgggtctcgatgggcattccgtcggacggctcctacggcatcgcccctggcgtgatctac
ggctacccggtgacggtgaagaacggcaagtacgccatcgtgcaaggcctggagatcagc
gcgttctcgcgtgcccgcatggacgccaccgacaaggaactgcgcgaagagcgcgccggc
gtcgagcatctgttcgcgaaaaagtaa
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