Rhodanobacter thiooxydans: LRK53_16220
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Entry
LRK53_16220 CDS
T08065
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00540
Lipopolysaccharide biosynthesis
rth01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LRK53_16220 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rth01005
]
LRK53_16220 (lpxC)
Enzymes [BR:
rth01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
LRK53_16220 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
rth01005
]
Lipid A
LRK53_16220 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
UJJ54481
LinkDB
All DBs
Position
complement(3570704..3571618)
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AA seq
304 aa
AA seq
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MIKQRTLKNVIRATGVGLHTGDKVYMTLRPAAPNTGIVFRRTDLTPPVDIRAREDNVGDT
RLSTTLVDGEARVATVEHLLSAMAGLGIDNAYVDLSAPEVPIMDGSAGPFVFLLQSAGIE
EQNVAKRFIRIKKPVKVQEGDKWASFEPFEGFKVGFSIDFNHPIISQRTSRAEIDFSTTS
FVKEVSRARTFGFMRDIEMLREHNLALGGSMDNAVVLDDYRVLNEDGLRYEDEFVKHKIL
DAIGDLYLLGHSLIGAYHAHKSGHELNNKLLRTLMADASAWEEVSYQDDPATSPISYAHP
AQAI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcagcgtacgctcaagaacgtcatccgggcgaccggcgtcggcctgcatacg
ggtgacaaggtgtacatgactttgcgacccgcggcgccgaatacgggcattgtgttccgc
cgcaccgacctgaccccgccggtggatatccgcgcgcgtgaggacaatgtcggtgatacc
cggctgtcgaccacgctggtcgatggcgaggcgcgcgttgccacggtcgagcacctgctc
tcggcgatggcgggcctgggcatcgacaatgcctacgtcgacctgtccgcgccggaggtg
ccgatcatggacggcagcgccggtccgtttgtcttcctgctgcagtccgccggcatcgaa
gaacagaacgtggccaagcgcttcatccgcatcaagaagccggtgaaggtgcaggaaggc
gacaagtgggccagcttcgagccgttcgagggcttcaaggtcggcttctcgatcgacttc
aaccacccgatcatcagccagcgcacctcgcgcgccgagatcgacttctccaccacctcg
ttcgtcaaggaagtcagccgcgcgcgcaccttcggcttcatgcgcgacatcgagatgctg
cgcgagcacaacctggcgctgggcggctcgatggacaacgcggtagtgctggacgactac
cgggtgctgaacgaggacggccttcgctacgaggatgagttcgtcaagcacaagatcctc
gacgcgatcggcgacctgtacctgctcggccacagcctgatcggcgcgtaccacgcgcac
aagtccggtcacgaactgaacaacaagctgctgcgcaccctgatggccgatgcctcggcc
tgggaagaggtcagctatcaggatgatccggccacctcgccgatctcctacgcccacccg
gcacaggccatctga
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