Remersonia thermophila: 98124533
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Entry
98124533 CDS
T10833
Symbol
VTJ83DRAFT_3503
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
rthe Remersonia thermophila
Pathway
rthe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
98124533 (VTJ83DRAFT_3503)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98124533 (VTJ83DRAFT_3503)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
98124533 (VTJ83DRAFT_3503)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_28
AAA_23
AAA_16
DUF3584
AAA_15
AAA_22
AAA
Zeta_toxin
AAA_25
SRP54
AAA_14
ORC-CDC6-like
RsgA_GTPase
AAA_33
PduV-EutP
Arf
AAA_30
NACHT
nSTAND3
Dynamin_N
AAA_13
Motif
Other DBs
NCBI-GeneID:
98124533
NCBI-ProteinID:
XP_070867381
JGI:
Remth1_3503
LinkDB
All DBs
Position
3:complement(2429188..2430150)
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AA seq
320 aa
AA seq
DB search
MADALPPPTIETNNLTYTFPDHTSGVSGITLSLPSRSRTLLVGANGAGKTTLLRLLAGKR
LAPRGAIRIAGLDPFQDALAGDHGVAYLGLEWVLSDVVRRDVSVKELLRSVGGDAYPDRR
DELVQVLDIDAERWRMHAVSDGERRRVQLAMGLLRPWRVLLLDEITVDLDVWSRAQFLGF
LRRETETRDCTIVYATHILDNLAGWPTHLVHMHLGRVKEWGLADEFLRRADQEKEQEGDD
GLGATGNSRLGELVLRWLKQDLKERGPRNRVQRGPEGLTYAVGGLGGYGYEPKGGKDGGE
AVVEAGAQGPQEWVEDRGQK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgccctccccccgcccaccatcgaaaccaacaacctcacctacaccttcccg
gaccacacttcgggcgtctccggcatcaccctctcgctgccgtcgcgctctcgcaccctg
ctcgtgggtgccaacggcgccggcaagacgacgctcctgcgcctcctcgcgggcaagcgc
ctggcgccgaggggcgcgatccgcatcgcggggctggacccgttccaggatgccctggcg
ggcgaccacggggtcgcctacctggggctggagtgggtgctgagcgacgtggtgcggcgc
gacgtgtcggtcaaggagctgctccggtcggtcggcggggacgcgtacccggaccgccgc
gacgagctggtccaggtgctcgacatcgacgccgagcggtggcgcatgcacgccgtctcg
gacggcgagcggcgccgcgtccagctcgccatgggcctgctccgcccctggcgcgtgctg
ctgctcgacgagatcacggtcgacctggacgtctggagccgggcccagttcctcggcttc
ctgcgccgcgagaccgagacgcgcgactgcaccatcgtctacgcgacgcacatcctcgac
aacctggccggctggccgacgcacctcgtccacatgcacctgggcagggtcaaggagtgg
gggctggccgacgagttcttgcgcagggccgaccaggagaaggagcaggagggcgacgac
ggcctcggcgccacggggaacagcaggctgggagagctggtgctgaggtggctgaagcag
gatctgaaggagaggggaccgaggaaccgcgtgcagagaggacccgaggggttgacgtat
gcggttggcgggctgggcggctacggatacgagccgaaagggggcaaggacggaggggag
gcggtggtggaggcgggggcccaggggccgcaggagtgggtggaggatcggggacaaaaa
tga
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