Remersonia thermophila: 98128743
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Entry
98128743 CDS
T10833
Symbol
VTJ83DRAFT_7293
Name
(RefSeq) hypothetical protein
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rthe Remersonia thermophila
Pathway
rthe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
98128743 (VTJ83DRAFT_7293)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98128743 (VTJ83DRAFT_7293)
Enzymes [BR:
rthe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
98128743 (VTJ83DRAFT_7293)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
98128743 (VTJ83DRAFT_7293)
Prokaryotic type
98128743 (VTJ83DRAFT_7293)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
98128743
NCBI-ProteinID:
XP_070863510
JGI:
Remth1_7293
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All DBs
Position
7:complement(join(1180700..1181339,1181496..1181993,1182094..1182296))
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AA seq
446 aa
AA seq
DB search
MFRMTRSSRLAGQTSKYFDAATSTTAATSRRLTRSSLARLAASTDEERAGKNAVADAALA
SGPTLRTPGEQDVDDNDDDDDDDKARRRIRRRLDGARPQPRPRPQARPQNHRPATGAVTI
APPTDWEEMYAVAKEMRLHGAAANAAVDTMGCERLAQRGASARDRRFQTLVALMLSSQTK
DTVNAEAMARLQNELPPYKAGAPPGLNLENMLAVDPKLLNELIGKVGFHNNKTKYLKQTA
EILRRDYGSDIPPTIQGLTSLPGVGPKMAHLCMSAEHGWNRVEGIGVDVHVHRITNLWGW
NGPRPTRTPEETRAALESWLPRDRWKEINWLLVGLGQAVCLPVGRRCGDCELGLRGLCRA
ADRAKVNEGRRRREKGGEVKREAKAAEQVKAESELDGDGEEAKVKAKAEEDEAAGREGVK
EEADEKKTQPEGTVKIKKEEDADVDG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggatgacgcgatcctcgcgcctcgccggccaaacgtccaagtactttgacgcg
gcgacgagcacgacggccgccacgtcgcgccgcttgacccgctccagcctcgcgcgcctc
gccgcctcgaccgacgaggagcgcgccggcaagaatgccgtcgccgacgcggcgctggcc
tcgggcccgacattgaggacgccgggggagcaggacgtcgacgacaacgacgacgacgac
gacgacgataaagcccgaagaagaatccgacgccggctcgacggcgcccgcccgcagccg
cggccgcgtccgcaagcccgcccgcaaaaccaccgacccgccaccggcgccgtgaccatc
gcgcccccgaccgactgggaggagatgtacgccgtcgccaaggagatgcggctgcacggc
gccgcggccaacgcggccgtcgacacgatggggtgcgagcggctcgcccagcgcggcgcc
agcgcgcgcgaccggcggttccaaacgctggtggcgctgatgctgtcgagccagaccaag
gacacggtcaacgccgaggcgatggcgcggctgcagaacgagctgccgccgtacaaggcg
ggggcgccgcccgggctgaacctcgagaacatgctcgccgtggacccgaagctgctcaac
gagctgattgggaaggttgggtttcacaacaacaagacaaaatacctcaagcaaaccgcc
gagatactccggcgcgactacggctccgacatcccccccaccatccaagggctgacctcc
ctgcccggggtcggccccaagatggcccacctctgcatgtcggccgagcacggctggaac
cgggtcgaggggatcggcgtcgacgtgcacgtgcaccgcatcacgaacctgtgggggtgg
aacgggccccggccgacgcggacgcccgaggagacgcgcgccgcgctcgagagctggctg
ccccgcgaccggtggaaggagatcaactggctgctcgtcggcctggggcaggcggtgtgc
ctgcccgtggggcggcggtgcggggactgcgagctgggcctccgcgggctgtgccgggcg
gcggaccgggccaaggtgaacgagggcaggaggagaagagaaaagggcggggaggtcaag
cgcgaggcgaaggcggcggagcaggtcaaggccgagagcgagctggatggggacggggag
gaagccaaggtgaaagcgaaagcggaggaggacgaggcggcggggcgcgagggggtcaag
gaagaggcggacgagaagaagacgcagccggagggaacggtgaagatcaagaaggaggag
gatgcggacgtggacggatga
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