Ruminococcus torques: RTO_10730
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Entry
RTO_10730 CDS
T02606
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetases
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rto
Ruminococcus torques
Pathway
rto00300
Lysine biosynthesis
rto00550
Peptidoglycan biosynthesis
rto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RTO_10730
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RTO_10730
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rto01011
]
RTO_10730
Enzymes [BR:
rto01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RTO_10730
Peptidoglycan biosynthesis and degradation proteins [BR:
rto01011
]
Precursor biosynthesis
Amino acid ligase
RTO_10730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
DUF1611
Motif
Other DBs
NCBI-ProteinID:
CBL25756
UniProt:
D4M3E4
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All DBs
Position
complement(1078238..1079704)
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AA seq
488 aa
AA seq
DB search
MKLDKLLERLDYTVVQGSDSTEVTTLINDSRKVEEGSVFVCISGAVSDGHKYAADVAAKG
AAAVVVEKDVEVPENVTVIKVEDTRYALALMSAAYFGYPADKMKVIGITGTKGKTTTTYM
IKSILEETGHKVGLIGTIEAIIGDKKIPSCNTTPESYTIHKYFAEMVEAGCDCVVMEVSS
QGLMLHRTAGIPFEIGIFTNLGRDHIGPNEHKDFDDYKRCKGLLFKQCKLGIANVDDKYF
KDVFKGSTCKIETFGFSPEADLRAENVELVSRPGYLGVAYHVAGVMDFDVEIDVPGKFSV
YNSLTAISVCRHFQVPVEMIKDALKKAKVKGRIEMIKVSDDFTLMIDYAHNAMSLESLLT
TLKEYNPKRLVCLFGCGGNRSKDRRFEMGEVSGRLADLTIITSDNPRFEEPQDIINDIKT
GIAKTDGKYVEICDRKEAIKYAIEHGEPGDVIVLAGKGHEDYQEICGVKHPMDERVLIKE
VLEELKEK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagataaattattagaacgcctggactacacagtagtacagggaagtgattct
acggaagtaacaacactgatcaatgattcaagaaaagtggaagaaggatctgttttcgtg
tgtatcagcggagcagtatctgatggacataaatatgcagcggatgttgcggcgaaaggt
gcggcagctgttgttgtagagaaagatgtcgaagtgccggaaaatgtgactgtaattaag
gtagaggatactcgttatgcactggctctgatgtcagcggcttactttggatatccggca
gataagatgaaagtcatcggtattacaggaacaaaaggaaagacaacaacaacttacatg
atcaagtctattcttgaagagacaggacacaaggttggattgatcggtacaatcgaggca
attatcggagacaagaagatcccgtcatgtaatacaacaccggagtcttatacaatccat
aaatattttgcagagatggtagaagctggctgtgactgtgttgttatggaagtttcatca
cagggactgatgcttcacagaacagcgggaattccatttgagatcggtattttcacaaat
cttggaagagatcatatcggtccgaatgagcataaggattttgatgattacaagagatgc
aaagggcttttgttcaaacagtgtaagctcggaatcgccaatgtggatgacaagtatttc
aaagatgtatttaaagggtctacatgtaagattgagacatttggattttcaccggaggca
gatcttcgcgcagagaatgtagaactggtatccagaccaggatatcttggtgttgcatac
catgttgcaggagtgatggactttgatgtggaaattgatgttccaggcaagttcagtgtt
tacaattcactgactgcaatctcagtctgccgccatttccaggtgccggttgagatgatc
aaagatgcacttaagaaggcaaaggtaaaaggacgtatcgagatgatcaaggtgtctgat
gattttacactgatgatcgattatgcgcacaatgcgatgagtcttgaaagtcttctgaca
acattgaaggaatataatccgaaacgtcttgtatgtctgttcggatgcggcggaaaccgt
tctaaagacagaagattcgagatgggtgaggtatctggaagactggcagacctgacaatc
attacatcagataatccgagatttgaagaaccgcaggacattattaacgatatcaaaacc
ggaatcgcaaagacagatggaaaatatgtggaaatctgtgatcgtaaagaggcaatcaaa
tatgcgatcgaacacggcgaaccgggtgatgttattgtgctggcaggaaaaggacatgag
gactatcaggaaatctgcggtgtgaagcatccgatggatgagcgcgtgctgatcaaagaa
gttctggaagaattaaaagagaaataa
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