KEGG   Rhincodon typus (whale shark): 109910852
Entry
109910852         CDS       T06055                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04010  MAPK signaling pathway
rtp04060  Cytokine-cytokine receptor interaction
rtp04150  mTOR signaling pathway
rtp04210  Apoptosis
rtp04217  Necroptosis
rtp04350  TGF-beta signaling pathway
rtp04620  Toll-like receptor signaling pathway
rtp04621  NOD-like receptor signaling pathway
rtp04622  RIG-I-like receptor signaling pathway
rtp04625  C-type lectin receptor signaling pathway
rtp04920  Adipocytokine signaling pathway
rtp05132  Salmonella infection
rtp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    109910852
   04350 TGF-beta signaling pathway
    109910852
   04150 mTOR signaling pathway
    109910852
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    109910852
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    109910852
   04217 Necroptosis
    109910852
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    109910852
   04621 NOD-like receptor signaling pathway
    109910852
   04622 RIG-I-like receptor signaling pathway
    109910852
   04625 C-type lectin receptor signaling pathway
    109910852
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    109910852
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109910852
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109910852
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:rtp04052]
    109910852
   00536 Glycosaminoglycan binding proteins [BR:rtp00536]
    109910852
Cytokines and neuropeptides [BR:rtp04052]
 Cytokines
  Tumor necrosis fators
   109910852
Glycosaminoglycan binding proteins [BR:rtp00536]
 Heparan sulfate / Heparin
  Cytokines
   109910852
SSDB
Motif
Pfam: TNF Haem_bd
Other DBs
NCBI-GeneID: 109910852
NCBI-ProteinID: XP_048450794
LinkDB
Position
Unknown
AA seq 179 aa
DSRPKLEVSHSSLTTAAQTNSLPRLMKQVGSGPRPRIAAHLTASPSREKENVIWQNESDS
TFTEGVEFRDNCFIIKRPGQYFVYTQVVFHSMGCQQRAIYLSHELAKLSPSYPEETILLK
TAKSSCHSRQRREPWYKTSYQGAIFEFIEGDQIFSRVNEDATGYVDTTEGKSFFGIFAV
NT seq 540 nt   +upstreamnt  +downstreamnt
gattcaagaccaaagctggaagtttcccattcatccctgacaacagctgctcagaccaat
agtttgcctcgtctcatgaaacaggtggggagtggcccacggccgagaatcgctgctcac
ctgacagcatcaccaagtcgtgaaaaagagaacgtaatttggcagaatgagagtgattcc
accttcaccgagggagtggagttcagggacaactgtttcatcatcaagaggcccggacag
tactttgtctacactcaggtggtcttccacagcatgggctgtcagcaacgggccatctac
ctcagccacgaactcgccaagctgtcaccaagttatcctgaggaaaccattctactgaaa
actgccaaatccagctgccactctcgccaacgcagggagccctggtataaaacctcctac
cagggagccatctttgagtttattgagggagatcaaatcttctccagggttaatgaggat
gcaacgggatatgtagacacaaccgaaggaaagagtttctttggaatatttgctgtgtaa

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