Rhincodon typus (whale shark): 109910852
Help
Entry
109910852 CDS
T06055
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04010
MAPK signaling pathway
rtp04060
Cytokine-cytokine receptor interaction
rtp04150
mTOR signaling pathway
rtp04210
Apoptosis
rtp04217
Necroptosis
rtp04350
TGF-beta signaling pathway
rtp04620
Toll-like receptor signaling pathway
rtp04621
NOD-like receptor signaling pathway
rtp04622
RIG-I-like receptor signaling pathway
rtp04625
C-type lectin receptor signaling pathway
rtp04920
Adipocytokine signaling pathway
rtp05132
Salmonella infection
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109910852
04350 TGF-beta signaling pathway
109910852
04150 mTOR signaling pathway
109910852
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109910852
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109910852
04217 Necroptosis
109910852
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109910852
04621 NOD-like receptor signaling pathway
109910852
04622 RIG-I-like receptor signaling pathway
109910852
04625 C-type lectin receptor signaling pathway
109910852
09152 Endocrine system
04920 Adipocytokine signaling pathway
109910852
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109910852
09171 Infectious disease: bacterial
05132 Salmonella infection
109910852
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109910852
00536 Glycosaminoglycan binding proteins [BR:
rtp00536
]
109910852
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Tumor necrosis fators
109910852
Glycosaminoglycan binding proteins [BR:
rtp00536
]
Heparan sulfate / Heparin
Cytokines
109910852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Haem_bd
Motif
Other DBs
NCBI-GeneID:
109910852
NCBI-ProteinID:
XP_048450794
LinkDB
All DBs
Position
Unknown
AA seq
179 aa
AA seq
DB search
DSRPKLEVSHSSLTTAAQTNSLPRLMKQVGSGPRPRIAAHLTASPSREKENVIWQNESDS
TFTEGVEFRDNCFIIKRPGQYFVYTQVVFHSMGCQQRAIYLSHELAKLSPSYPEETILLK
TAKSSCHSRQRREPWYKTSYQGAIFEFIEGDQIFSRVNEDATGYVDTTEGKSFFGIFAV
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gattcaagaccaaagctggaagtttcccattcatccctgacaacagctgctcagaccaat
agtttgcctcgtctcatgaaacaggtggggagtggcccacggccgagaatcgctgctcac
ctgacagcatcaccaagtcgtgaaaaagagaacgtaatttggcagaatgagagtgattcc
accttcaccgagggagtggagttcagggacaactgtttcatcatcaagaggcccggacag
tactttgtctacactcaggtggtcttccacagcatgggctgtcagcaacgggccatctac
ctcagccacgaactcgccaagctgtcaccaagttatcctgaggaaaccattctactgaaa
actgccaaatccagctgccactctcgccaacgcagggagccctggtataaaacctcctac
cagggagccatctttgagtttattgagggagatcaaatcttctccagggttaatgaggat
gcaacgggatatgtagacacaaccgaaggaaagagtttctttggaatatttgctgtgtaa
DBGET
integrated database retrieval system