Rhincodon typus (whale shark): 109911435
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Entry
109911435 CDS
T06055
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109911435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109911435
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109911435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_13th
Ig_NUP210_2nd
Ig_NUP210_15th
Ig_NUP210_3rd
Ig_NUP210_1st
Ig_NUP210_5th
Ig_NUP210_7th
Ig_NUP210_8th
Ig_NUP210_4th
Ig_NUP210_14th
Ig_NUP210_6th
Ig_NUP210_16th
Ig_NUP210_9th
NUP210_Ig
Big_2
Ig_Eae
Motif
Other DBs
NCBI-GeneID:
109911435
NCBI-ProteinID:
XP_048468636
LinkDB
All DBs
Position
26:complement(13668712..13798654)
Genome browser
AA seq
1869 aa
AA seq
DB search
MATSLWAWLLFVEAVGFRYSAGTKLNVPKVLLPYSATVKVNFTLEADEGCYLWFSTRPDV
ATIEPIFQNDTECSNTALISVRSTQPTRLTSIIIAEETVTGQVLRCDVMVDIINEIEIIS
TTRELYVDDSLLKLTVRALDAEGNTFSSLEGFIFEWSIVKNEDMDNIAESPSKIRIMKFS
ESTYLPPVHIARMERDGVQGDIILVSGLMTGTANLKTRLQDAIYKNVPAASIRVTILENI
ILSPAHDIYLLIGSFIRYRVAKIVNGKMTEIEMPSEQYRLELRSGEMGSYDVDTTVAELD
SDTCIVTAVQEGQISLVLTYKNIHMQALSQLPNSTIYVVTAGFLGFSVFPGERWVLEVGR
MYEFRVEVYDKSSNKVYLSDNLNIATTIPESYFRILNKSVNGTYHYVDVLSAGQEVIKAS
LFGVVGESLVVPIINHQEVIIYEPIILKPEILVFPWHPKPRSYRHLIQVKGGSGNFTWSS
GNESVALVTVKGVIATGDSRGFSIIHARDVENPIHFGKMQVNVLRPVSIEFVQSHVEIEV
GQTLDLPIMVYGLLDTDAMETVPVNNCTLMNLAVEMDKQGVFRVTQGRLEPGAAHCTGIS
IEAETPGHTVLTASAGFLEVHFSSSITIASYHRLRAIDPVAVAIVTLTSSKEMLFEGGPR
PWVLEPSGFFTDLIGEKGEAVIIKQQRAPMVKKKNHHGFRVICVSLGEQFLTFKVGNHPS
LLNPHPAIESIKVKFVCAVPTSVTLVPVYKSRELGLPCPLLQHNKQLVPVSFCRNTILEL
TAYDKYGRKFDNFTSMQINWKSSNFSLGSFHPAIQMEMFLRDDGSGQKRLHGHRMVIVYK
RKGTVTISVFLAGYGKTDTVMPQSHVDVLFSPVSAAVDLLLVDDVSLVPKNLTVYNHPDV
LEIVYLTEGSGYFFVNTTDTEILTSTYLEAKNYVQIRPLQPGIVTMKAYDLCLTCKGPAR
AEIYVSDILDFELNFIHKIEIGKSVPVNVRVLDFFKKPFLNRYFRYMNVSLQAASPIVTL
EPITDLDKYAASYLLRAVALGQTTLIATARDKYGRKLSSSPRQIEAFPPFRLIPQKVTLI
IGGMMQVMSEGGPQPQTNIYFFINNDTIAKVNELGQLTALMVGTAKVTAIIQAVNDDTGK
VVVFSKDEVTVNVIQLRGIKIHAPVTRLRTGTQLPVYVVGVTSCQTPFTFGSAVPGLTFH
WTTTKREVIELVSRHSEISLQLSAEHNFAMLLYSKAEGKTGLKVTVTAQNPSAGQFEGKH
DRFSDEIQIMVFGILQLLPLSLPAKEVLMSPNSHLKFQTSRDGKAYVSYEVRKCPHNKSV
IVEDGHGILVSGPKTGSSALTVTSLEYFGLNQTIVTGVRVAPVAYLSINTSPKLYIAKNE
ELAALPLGMTLTFTVNFYDLSGEQFHAHNTELYLALNRDDLLLIGPGTRNNTYVAQAANI
GLTLLAVWDNRHPGIADYIPIPTQYAIWPNISENVILSDVICFSSVLVNSEGEPGNWYLL
SSEVLQIDPATGLGVTRSTGSTTVYYEIPGIVRTYREVTVIGVGKATVSFHGFTCVIGRP
NINVYRFLVTTMNKDSSLRGDCSFAQVKAMSKLNPASNLACSVRFSNIGLQSLAVSVFSV
EPEFLADTGHYSCAVSIKELSDSVRKDLSIGGDTYISVKASVLGGHYAGQVGRTEIPFIP
GFYINQSVVTLSCKEPTVNITIFGIVKVLNELEVRSQSPAIVVSQPVRLHSLHNAVYSLS
TANLSLLQQGLPCTNVSVSSPMTKQSVHVTVTVLRSGGNGGTAGKRELPFEESTFFDQLV
ESYQVLMFTLFAVLATTAIIFIAYNAFLTRIQTIPVIYVSTTPQTGYRSTTPCSNPRRRY
LQSWLWSVR
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagcctttgggcctggctcctgttcgtcgaggccgttggtttccgttattcc
gccgggaccaagctgaatgtgcccaaagtattgctgccttactctgcaaccgtgaaggtt
aattttaccctggaggccgatgaagggtgttacctatggttttcaacacgaccagatgta
gcaactattgaacctatatttcagaatgatactgaatgttcaaatacagcactgatatct
gttcggtcaactcagcctactcgcctcaccagcatcattatagctgaggaaacagtgaca
ggacaagtgttgcgctgtgatgtaatggttgatataataaatgaaattgaaattatatca
acaacccgggagctgtatgttgatgactcgctcttaaaattaacagtcagagcattggat
gcggaaggcaatacctttagtagcttggaaggatttattttcgaatggagcattgtgaag
aatgaagacatggataatattgcagagtcgccaagtaaaattagaataatgaagttttca
gagtccacctatttaccacctgtacatattgcaagaatggaaagagatggagtgcaggga
gacatcattcttgtatctgggttaatgactggtactgctaatctgaaaacacgactacag
gatgctatatataagaatgttcctgctgcatcaatacgtgtcactattttggaaaacatt
atcttgagtccagcccatgatatttatttgttgataggctcttttattcgctacagagtt
gctaaaattgtaaatggaaaaatgacagaaattgagatgccatctgaacagtacagattg
gaattaagaagtggtgaaatgggctcttatgatgtggacacaacagttgcagaactggat
tctgacacctgcattgtcacagcagtccaagaggggcagattagcttagttcttacatat
aagaatattcatatgcaagcactgtctcagctgcccaattctacaatatatgttgtaacg
gctggttttctaggtttttctgtctttcctggagaaagatgggttttggaagtaggaagg
atgtacgaatttagagtggaagtttacgacaaaagcagtaataaagtttatttatctgat
aatttaaatattgccactaccattccggaatcatacttcagaatcttgaataaatctgtt
aatggaacttatcattatgttgatgttttatcagctggacaagaagtaattaaagcttca
ctctttggagtagtaggagagagcttggttgttcccattatcaaccaccaagaagtaatt
atttatgaaccaataatcctgaagcctgaaatccttgttttcccttggcatcccaagccc
cgaagttatcggcacttaattcaggttaaaggtggaagtggcaactttacatggtcatca
ggtaatgaaagtgtagctctggtgacagtaaaaggtgtaatagcaactggtgacagccga
ggtttcagcattatacatgctagagatgtggaaaatccaattcactttggcaaaatgcaa
gtcaacgtgctgaggccggtcagtatagagtttgtccaatcccatgtagaaattgaggtt
ggtcagaccctcgatctacctatcatggtttatgggctgttggatacagatgccatggaa
acggttccagtgaataactgcacattaatgaacttggcagtagagatggacaagcaagga
gtattcagagtcactcaagggagattagagccaggtgctgcacactgcacagggataagc
attgaagcagagacaccaggccatacggtactaacagctagtgctggatttctggaggtc
cattttagcagcagtatcaccattgcttcttaccatcggcttagagctattgatccggtt
gctgttgctatagtcacactgacttcttcaaaggaaatgctgttcgaaggaggtcctaga
ccttgggtgttagaaccatctggatttttcacagatctgattggcgaaaagggagaagca
gtaatcatcaaacaacaaagagctccaatggtaaaaaagaaaaatcaccatggctttaga
gttatttgtgtatcattgggtgaacagtttctgacatttaaagttggcaatcatccaagt
ttactgaacccccatccagccattgagtccattaaagtgaagtttgtttgtgctgtgcct
accagtgtcactttggttcctgtttacaagtcacgtgaacttggtcttccatgtccccta
ttgcaacacaacaaacaattggtacccgtttccttttgcaggaatacaattttggagcta
acagcctatgataaatatggtcgaaaatttgataacttcacttcaatgcaaattaattgg
aaatcatccaacttttctttgggcagttttcatccagcaatacaaatggaaatgttctta
agagatgatgggagtggacaaaagaggcttcatggtcatcggatggttatagtttataag
aggaaagggacagtgactatttcggtattcctggccggctatggaaagactgatactgtc
atgccccaaagccatgttgatgttttgttttcaccagtatcagctgctgttgatttgttg
ctggtggatgatgtgtccttagtgcccaaaaatctcactgtatacaaccatcctgatgtt
ttggaaatagtttatttaactgagggctcaggatactttttcgttaataccactgatact
gagattctgactagcacgtacctggaagccaaaaactatgtacaaataaggccactacaa
ccaggaattgtgacaatgaaagcatatgacttgtgcctgacgtgcaaaggtccagccaga
gcagagatctatgtatcagatatattagattttgaactaaattttattcacaagattgaa
attggaaagtctgttccagttaatgtcagggtgttggatttcttcaagaaaccctttttg
aacagatactttcgttacatgaatgtaagcttacaggcagcttccccaattgtcacctta
gaaccaattactgacttggataaatatgctgcaagttacttgctgagagctgtggccttg
ggtcaaaccactcttatagcaacagccagagacaagtatggtcgaaagttgagctcttcc
ccacgtcagattgaagcattcccaccttttagactaatcccacagaaagtgactttgatc
attggcggcatgatgcaggtgatgtctgaaggtggcccacaaccacagacaaatatttat
ttctttattaataatgacaccattgctaaggtaaatgaattgggccagctgactgcccta
atggtaggaacagcaaaagtaactgctattatccaagctgtcaacgatgacacaggaaaa
gtggttgttttctccaaggatgaagtgactgtaaatgtcattcaactaagagggataaaa
attcatgctccagtgactagattgaggactggaactcagctgcctgtatatgtcgtggga
gtcacaagttgccagactccatttaccttcgggagtgcagtaccaggactgacttttcac
tggacaacaacaaagcgggaggtgattgagcttgtcagcaggcactcagagatttccttg
cagctttctgcagaacacaattttgcaatgctgctgtatagcaaagcagaagggaaaaca
ggtttaaaagtcacagtaacagcgcagaatccatctgctggacagtttgaaggaaaacat
gacagattttctgatgagattcagattatggtgtttggaatattgcaacttttgcccctc
tctctaccagcaaaagaagtgctgatgtcgccaaattctcatcttaagtttcaaacctct
agggatggtaaagcctatgtcagctatgaagtgcgtaaatgtcctcacaataagtctgtg
atagtggaggatggacatggcatcttggtatctggacctaaaactggttcctctgcactc
acagtaacatcactcgaatactttggactgaaccaaactattgtaacaggagtgagggtg
gctccggtggcatacctcagtattaacaccagcccaaagttatatattgccaaaaatgaa
gaactggctgctctccctcttggaatgacattgacttttacggttaacttttatgatctt
agtggagaacagttccatgcacacaacacagaattgtatttagctcttaacagggatgat
ctgctgctgattggacctggtactagaaataatacttatgtggcacaggctgccaatata
ggattgaccctgttggcagtttgggataacaggcatccagggattgcagactatatcccc
atacctacccagtatgcgatatggcccaacatatcagaaaatgtgatactgagcgatgtg
atatgtttcagcagcgtattggtgaacagtgaaggtgaacctgggaactggtatctgtta
tcaagtgaagttctacagattgacccagccacaggattgggagttacgaggagcacaggg
tcaaccacagtctattatgaaattccaggaattgtgagaacctacagagaagtcacagtt
attggtgtgggaaaagccacagtttcctttcatggtttcacttgtgtaattggtcgtcct
aatattaatgtgtacagatttcttgtgacaactatgaacaaagatagcagtctgagagga
gactgcagttttgctcaagttaaagctatgtcaaagctaaatcctgcatcaaaccttgcc
tgttctgtgcggtttagtaatattggattgcagtccctagcagtttctgttttctctgtg
gaaccagaattcttagctgatacaggtcattacagttgcgccgtcagtataaaagaacta
tcagactctgtacgtaaggatttaagtataggcggagacacctatatatctgtaaaggct
tctgtcttgggaggccattatgcaggacaagttggaagaacagagattccattcattcct
ggattttatataaaccaatcagttgtgactcttagttgcaaagagccaacagttaacatc
actatatttggtatagttaaagtattgaatgaactggaggttcgatcacaatcacctgcg
attgtagtgagtcagcctgttcggttacattcattgcacaatgctgtttattcactaagt
actgcaaatcttagccttcttcagcaaggattaccatgtaccaatgtcagcgtatccagc
cccatgacaaaacaatctgtacatgtgaccgtcacagttctacggagtggaggcaatggt
ggcacagcaggcaagagagaattaccttttgaggaatcaactttctttgaccagctagtg
gaatcctaccaagtattgatgttcaccttatttgcagtcctggctacaactgctataatc
tttattgcttataatgccttcttgacaaggatacagactatccctgtaatttatgtttct
acaacaccacagacaggttacaggtcaacaactccatgtagtaatccccgaaggcgatat
ctacagtcctggctgtggagtgtacgctaa
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integrated database retrieval system
