Rhincodon typus (whale shark): 109912001
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Entry
109912001 CDS
T06055
Symbol
psen2
Name
(RefSeq) presenilin-2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109912001 (psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109912001 (psen2)
Peptidases and inhibitors [BR:
rtp01002
]
Aspartic peptidases
Family A22: presenilin family
109912001 (psen2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF6541
Motif
Other DBs
NCBI-GeneID:
109912001
NCBI-ProteinID:
XP_020366969
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Position
5:83703572..83722013
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AA seq
461 aa
AA seq
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MISSDSEEELYTERTALMSANSSAMPSYQERDGTPGAANVRSNRRRLAASQPANPEERSS
GTESGPASRDAGGEGEEEEEEELILKYGAKHVIMLFVPVTLCMAVVVVTIKSVSFYTQKD
GQLIYTPFTEDTDSVGQRILNSILNTLIMISVIVVMTIILVLLYKYRCYKFIHGWLILSS
LLLLFLFTYIYLGEVFKTYNVAMDYPTLILIIWNFGAVGMVCIHWKGPLQLQQAYLIMIS
ALMALVFIKYLPEWSAWVILGTISIYDLIAVLCPKGPLRMLVETAQERNEPIFPALIYSS
TMVWLVTMTKRSMDPDEPLNYTCNADNYRDVEIEANHHAAEGLNNVADLPPTQIQGVRQS
AAGGEELEEEKGVKLGLGDFIFYSVLVGKAAAGASGDWNTTLACFIAILIGLCLTLLLLA
VFKKALPALPISITFGLVFYFSTDNLVRPFMDTLAFHQFYI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatcagacagcgaagaggaactgtacactgagaggacggctctgatgtcagcc
aactcctctgcaatgccctcctatcaagagagggacgggacacctggtgctgccaatgtc
cggtctaaccggcgacgattggcagccagtcaaccggcaaatcctgaggagaggagcagt
ggcaccgaaagtgggcctgcaagcagagatgcaggcggggagggtgaggaggaagaagaa
gaggagctgattctaaagtatggggcgaagcacgtcatcatgctgtttgtgcctgttaca
ctttgtatggcggttgtggtagtgacaattaaatctgtcagcttctacacacaaaaggat
gggcaactaatctacaccccatttaccgaggatactgactctgttggacaacgtatcctc
aactccatcctgaacacattaataatgatcagtgttattgtcgtaatgactataattctt
gttcttctttacaagtatcgatgttataagtttatccatggatggctgattctctcgtct
ctcctgttgctattcctcttcacatacatttacctgggtgaagtctttaagacgtacaat
gtggccatggactaccccaccctgatcctaatcatttggaacttcggagcagtaggaatg
gtttgtatccactggaagggacctctgcagctccagcaggcttacctcatcatgatcagt
gcactgatggccttggtcttcattaaataccttcctgaatggtcagcctgggtcattctt
ggcacaatatctatttacgatctaatagcagtgctgtgccctaaaggtcccctacgtatg
ctcgtggaaacagcacaggagagaaatgaaccaatatttcctgccttaatatattcatcc
acaatggtttggttggttacgatgacaaagcgaagtatggaccctgacgagcctctgaac
tatacttgtaatgcagataattatcgtgatgtggagattgaggcaaatcaccacgctgct
gagggattgaacaatgttgctgatttgcctccaactcagattcaaggggtgcgccaatca
gctgccgggggagaggaactcgaggaagaaaagggcgtgaaacttggtttgggggacttc
atcttttacagtgtcctggtgggcaaggctgctgcgggtgccagtggagactggaacaca
accttggcctgcttcatcgccattctgattggattgtgcctcacgctcctgttgctggct
gtgtttaagaaagctttaccagcactccctatttccatcacctttggcctggtgttctac
ttctccactgacaacctggtgcgacctttcatggacacactcgcttttcaccagttctat
atttag
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