Rhincodon typus (whale shark): 109912305
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Entry
109912305 CDS
T06055
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1-like
KO
K01116
phosphatidylinositol phospholipase C, gamma-1 [EC:
3.1.4.11
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00562
Inositol phosphate metabolism
rtp01100
Metabolic pathways
rtp04012
ErbB signaling pathway
rtp04020
Calcium signaling pathway
rtp04070
Phosphatidylinositol signaling system
rtp04370
VEGF signaling pathway
Module
rtp_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
109912305
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
109912305
04370 VEGF signaling pathway
109912305
04020 Calcium signaling pathway
109912305
04070 Phosphatidylinositol signaling system
109912305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109912305
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
109912305
Membrane trafficking [BR:
rtp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
109912305
Endocytosis
Macropinocytosis
Phospholipase C
109912305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
SH2
PI-PLC-Y
EF-hand_PLCG2
C2
SH3_1
PH
SH3_9
EF-hand_PLCG1
PH_12
SH3_2
SH2_1
EF-hand_6
EF-hand_like
EF-hand_7
GDPD
DUF5315
Motif
Other DBs
NCBI-GeneID:
109912305
NCBI-ProteinID:
XP_048452132
LinkDB
All DBs
Position
4:94930980..95143811
Genome browser
AA seq
1272 aa
AA seq
DB search
MSGSRVGFPNGFLLEDGRMEADVSRIIRNLELGTVMTLYYQKKSQRPERKTFQVKLETRQ
ITWCRTSDKIEGEIDIREIKEIRPGKNSRDFERYPDDARKLDASLCFVILYGMEFRLKTL
SLSAFNEDDINLWITGLNWLVQDTQKSSTPLQVERWLRKQFNLMDRNKENSITVKDLKVM
LPQVNYRVPNMRFLRDRLLSEDIKLIFREEQRNVERPELCQVTLYDFQRFLQYDQKESWA
NDINKVRECIFNYFKDPLREISDPVLQLDEFLAYLFSKENMILDSRFERVTSEEMNYPLS
YYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPDDLPIIYHGHTLTSK
IKFLDVLYTIKEHAFITSEFPIILSIEDHCSVVQQRNMASHFKKVFGDMLLTKPVDINAD
ELPSPNQLKKKILIKHKKLVEGNLYEEVSSASYSENDISNSIKNGILYLEDPIDHNWSPH
YFVLTSNKIYYSEETSRYQNNEDEEEEEQKEEFNNNDLHFSEKWFHGKLGGGRDGRQIAE
KLLHEYCTETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIHSRQEAGTTKFYLTDN
LVFDSLYALISHYREVPLRCNEFEMRLTDPVPQPNAHESKEWYHANLTRLQAEHMLMRVP
RDGAFLVRKRNEFNSYAISFRAEGKIKHCRIQQEGRLFMLGSSAEFESLVDLVNYYEKHP
LYRKMKLRYPINEETLEKMGTTELDYGALYEVRTPHFYVEANKMPTARCTVKALYDYKAQ
REDELSFCKQALIHNVDKQDGGWWRGDYGGKKQLWFPANYVEEITNTLVPEQDEASVENS
PLGSFLKGFIDVPTCHVVIQKEGKGSKPYVFTIHSQQMSHPVQMLDVAADGQEDLNDWAA
KIREATQNADARMQEGKIMERRKKIALELSELVVYCRPVPFDEEKIGTDKACYRDMSSFP
ETKAEKYANKSKGKKFLQYNHRQLSRVYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPD
KPMQLNQAIFTMNGKSGYVLHPDIMRDENFDPFDKNTLKGVEPITVQLQILGARHLPKNG
RSIVCPFVEVEVCGAEYDNSKYKTEVVADNGLNPVWLFKQFVFDINNPEFAFLKFIVYDE
DMFSDPNFLAQATYPVKSLKTGYRSVPLKNSYSEELELASLLVHIEIVNAKEEDDENLYS
SIQQLRDRTNELSSQVSSFERNNGCDSRYQQQLDELRVAQDQLMELTEARNRRLIEKKKR
DRLRQQMVNKRN
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggtccagagtcggttttccaaacggatttttgctggaagatgggaggatggag
gcagacgttagcaggatcatccgaaacttggagctgggcactgtcatgactttatattac
cagaagaaatcgcagagacccgagagaaaaacttttcaggtgaaactggaaaccaggcag
atcacctggtgcaggacgagcgacaagatcgaaggcgaaattgacatccgggaaattaaa
gaaattcgacctgggaagaattcaagagattttgaacgttatccagatgatgcgcggaaa
ctggatgctagtctatgctttgttattctgtatgggatggaattcaggctgaaaacacta
agtctttcagcattcaatgaagacgatattaatttatggataacaggattgaactggctg
gttcaggacacccagaagtcttctacaccccttcaggtagaaaggtggctcaggaagcaa
tttaatttgatggataggaacaaagaaaacagtatcacagtgaaggatctaaaggtcatg
cttcctcaagttaactacagagtcccaaatatgagattcttgcgggacaggttgttgtca
gaagacattaaattaatttttcgagaagaacagaggaatgtcgaaaggcctgagctgtgt
caggttaccctgtacgactttcaaaggtttctgcaatatgatcagaaggaaagctgggca
aatgacatcaacaaagttcgagagtgcatctttaattactttaaagacccattgagggag
atatcagaccctgttttacaactggatgagttcttggcatatctgttctctaaagagaac
atgattctggattcaaggtttgaacgtgtgacttcagaggaaatgaactatcctctttcc
tattattggatctcttcatcacacaacacgtatctgactggtgaccagttttccagtgag
tcatcattggaggcctatgcccgatgcctgaggatgggatgtcgctgcatagaactggat
tgctgggacggcccagatgacctgccaattatttaccacggacacactcttacctccaaa
atcaaattcctggatgtgttgtacacaataaaggaacatgccttcatcacctcagagttt
ccaattattctgtccattgaagaccattgcagtgttgtccagcaacgaaacatggcatct
catttcaagaaggtctttggggacatgttgttgaccaaacctgtagacatcaatgcagat
gaactcccatcaccaaatcaactgaagaaaaaaatcctgataaagcacaagaagttggtg
gaaggcaacctgtacgaagaggtttcatcagcaagttattcagaaaatgacataagcaac
tctattaaaaatggcatcctatacctagaggatcccattgaccataactggagtccacat
tattttgtcctcacaagtaataagatctattattctgaagaaacatcgagataccagaac
aatgaggatgaagaggaagaagaacaaaaagaggagttcaacaacaacgatctgcacttc
agcgagaagtggttccatgggaagctcggtggcgggagagatggtcgtcagatagccgag
aagcttctccatgagtactgcacggagaccggtggaaaggatggcaccttcctcgtgagg
gagagtgagacatttgtgggtgattacactctgtctttctggagatcagggagagttcaa
cattgccgcatccattcacggcaagaagctggcaccaccaagttctacctgactgataat
ctggtctttgacagcctctacgccttgatcagccattaccgggaggttccattgcgttgt
aatgaatttgagatgagattgactgaccctgtaccacaaccaaacgctcatgaaagcaaa
gagtggtaccacgccaacctaacacgactacaggctgagcacatgctaatgagagtacca
cgggatggagccttcttagtgcgcaaacgaaatgaattcaactcatacgccatatccttt
cgggcggaggggaaaattaaacactgccggatccaacaggaaggccgcctcttcatgctt
ggaagctcagcagaatttgagagcctagtggacctggtgaattattatgaaaagcaccct
ttgtatcgtaaaatgaaactgcggtacccaatcaacgaggaaaccttggagaagatgggt
acaacagaactggattatggagcactttatgaagtacggactcctcatttttatgttgaa
gctaataagatgccaactgcaaggtgcactgtcaaagcactgtatgattacaaagcacag
agagaggatgagctatccttctgtaaacaggctctgatccacaatgtcgacaagcaagat
ggtggatggtggcgaggagactacggaggtaaaaaacagctgtggtttccagcaaactat
gtggaggagataaccaacacactagtccctgaacaggatgaagcgtctgtggaaaacagt
ccattgggaagtttcctcaaaggatttattgatgttccaacatgtcatgtcgttatccag
aaggaaggaaaaggaagcaaaccgtatgtgttcacgatccactcccaacaaatgtcccac
ccagtgcagatgttggacgtggctgcagatggtcaggaggatctgaatgactgggccgca
aagatccgagaggcgacacagaatgcagatgccagaatgcaagaaggaaaaataatggag
agacggaagaagattgcactagaattatcagagctggttgtctattgtcgacctgtgcca
tttgatgaggaaaagatcggaacagacaaagcctgttacagagacatgtcgtccttcccc
gaaacaaaggcagaaaagtatgccaacaagagtaagggcaagaaatttcttcagtataac
cataggcagctgagccgcgtctatccaaagggccaacgcttggactcctccaactacgac
ccactgccgatgtggatctgcggcagccaactggtggcactcaacttccagacgccagat
aaaccaatgcagctgaaccaggcgatcttcacaatgaatggaaagagtggctatgtcttg
caccctgacatcatgagagatgagaactttgacccttttgacaagaacactctcaagggt
gtggaaccaatcacagtgcagcttcagatcctaggagcacgacacttgcccaagaatgga
aggagcattgtttgtccatttgttgaagtggaggtatgtggagctgagtatgacaacagc
aaatacaagacagaggtggtggcggataatgggttaaatcctgtatggctcttcaagcaa
tttgtctttgacatcaacaatcctgaatttgcctttttgaagttcatcgtgtatgatgag
gacatgttcagtgaccccaacttccttgcccaggcaacctatcctgttaaaagccttaaa
acaggttacagatctgtgcctctgaaaaacagctacagtgaggaactagagctggcctct
ctacttgttcacattgagatagtcaatgccaaggaggaagacgatgagaacctctattca
tccatccagcaactacgcgatcggacaaacgagctttccagtcaggtgtcaagttttgaa
cggaataatggctgtgactccaggtaccagcagcaactggatgagctacgggttgcgcag
gatcagttgatggagctaactgaagctcgaaacagacgactcatcgaaaagaaaaagaga
gacagactacggcaacaaatggtgaacaagagaaactaa
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integrated database retrieval system
