Rhincodon typus (whale shark): 109913020
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Entry
109913020 CDS
T06055
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109913020 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtp03400
]
109913020 (nthl1)
Enzymes [BR:
rtp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
109913020 (nthl1)
DNA repair and recombination proteins [BR:
rtp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
109913020 (nthl1)
Prokaryotic type
109913020 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
109913020
NCBI-ProteinID:
XP_020368074
LinkDB
All DBs
Position
21:16150312..16167313
Genome browser
AA seq
361 aa
AA seq
DB search
MRVGIMASPSPYFTPGVLTRNMRRRVSVPRELERDPQPGSNLAKSPAVGRLAAGEGKPAR
RHAAGQPGLQIQADTIQPGNARRQKSEPLQTAGISGRMLGRPQSASSVEDTPSKWEPKDW
REQLANIREMRKCRDAPVDHMGAEQCFDKTAAPKVMRYQVLLSLMLSSQTKDQVTFAAMK
QLREHGLTVENILKMDDKTLGELIYPVGFWRNKVKYIKQTTAILKEQYNGDIPSSVSELV
KLPGVGPKMAHLTMKIAWNNVSGISVDTHVHRIANRLKWVKKETKNPEESRLALEEWMPR
ELWSETNWLLVGFGQQMCLPVNPRCAVCLNRDICPTAKNNLRKTNPRLPPSSPVQPCQQQ
Q
NT seq
1086 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgggcattatggcgtccccctcgccttattttacaccgggcgtactgactcgg
aacatgcgccgacgggtgtccgtgccccgggagctggagcgggatcctcaacccggctcc
aacttagcaaagagccctgccgttggtaggttggcggcaggggaagggaaacctgcccgc
aggcatgcagcaggccaacccggcctccagattcaggcggacacgatccagcctggaaat
gcgcggaggcagaaaagcgagcccttgcagactgctggcatttcgggccgaatgctcggc
cggccgcagtctgcttcctcagtagaggacacaccctctaaatgggagccgaaggactgg
agggagcagttggctaacattagggaaatgaggaagtgcagggatgcgcccgtggaccac
atgggcgccgaacaatgcttcgacaaaacggcagcccccaaggtcatgaggtatcaggtg
cttttgtcactcatgctgtccagccaaaccaaggatcaggtgacatttgcagcaatgaag
cagctgagggaacatggcttgactgttgagaacatcctcaagatggatgataagacgctt
ggagagctcatctatccagttggcttctggaggaataaagtgaaatacatcaaacagacc
acagcaatcctgaaggagcagtacaatggtgacattcccagcagtgttagcgagcttgtg
aaacttccaggagtaggaccaaagatggctcatctcaccatgaagatagcctggaacaac
gtgtctggcatcagtgttgacacccatgtgcatagaatcgcaaatcgactaaagtgggtc
aaaaaagagaccaaaaacccagaagagagcagattggcgctggaagagtggatgccacgg
gagctctggagcgagaccaattggctgctggtgggctttggtcagcagatgtgcctgcca
gtgaatcctcgctgtgctgtatgtctcaacagagatatctgtcccacagccaagaacaat
cttcggaaaacaaatcccaggcttcctcccagctctccggttcagccttgccaacagcaa
caataa
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