Rhincodon typus (whale shark): 109913147
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Entry
109913147 CDS
T06055
Symbol
snu13a
Name
(RefSeq) SNU13 homolog, small nuclear ribonucleoprotein a (U4/U6.U5)
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03008
Ribosome biogenesis in eukaryotes
rtp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109913147 (snu13a)
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109913147 (snu13a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109913147 (snu13a)
03009 Ribosome biogenesis [BR:
rtp03009
]
109913147 (snu13a)
Spliceosome [BR:
rtp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109913147 (snu13a)
Ribosome biogenesis [BR:
rtp03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
109913147 (snu13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
PELOTA_1
Adenosine_kin
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
109913147
NCBI-ProteinID:
XP_020368214
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All DBs
Position
21:complement(37339115..37342723)
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AA seq
128 aa
AA seq
DB search
MTEQDVNPKAYPLADAQLTKTILDLVQQAGNYKQLRKGANEATKTLNRGIAEFIVMAADA
EPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVCRPVIASSVTIKEGSQLKPQIQSVQ
QAVERLLV
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcaagacgttaaccctaaagcctatcctcttgcggatgcccagctaacaaag
acaattctagatcttgtgcagcaagcggggaactacaaacagcttcgaaagggagctaat
gaagccaccaagaccttgaacagaggaattgccgagttcatagtgatggctgcagatgct
gaaccattggagattatccttcatttacctcttctgtgcgaagataaaaatgtgccttac
gtttttgtaaggtctaaacaggctctgggccgtgcgtgtggtgtgtgtcgaccagtcatt
gcatcctctgtcaccataaaggaaggctctcagctgaaaccacagattcagtctgttcaa
caggcggttgaacgtttactagtttga
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