Rhincodon typus (whale shark): 109913301
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Entry
109913301 CDS
T06055
Symbol
mmp9
Name
(RefSeq) matrix metalloproteinase-9
KO
K01403
matrix metalloproteinase-9 (gelatinase B) [EC:
3.4.24.35
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109913301 (mmp9)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.35 gelatinase B
109913301 (mmp9)
Peptidases and inhibitors [BR:
rtp01002
]
Metallo peptidases
Family M10
109913301 (mmp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_4
Reprolysin_3
DUF4953
Reprolysin_5
New_glue
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
109913301
NCBI-ProteinID:
XP_020368382
LinkDB
All DBs
Position
19:complement(46576859..46590449)
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AA seq
675 aa
AA seq
DB search
MMLIRVVLSVALLAHSSFSAPMTPPLVTFPGEQNVTDAEMAMDYLKRFGYLNLENTGNAL
ISLQSAIIKMQKTLGLPVTGELDKSTITAMKQPRCSVPDVLNYKTFDDEKWDHTDLTYRV
TGYTPDLDPSVVDDAFARAFKLWSDITPLTFTQIYSGEADIMIRFGREWHGDSYPFDGYN
GLLAHAYPPGKNVYGNLHGDAHFDDDEFWTLGKGAAVKTHFGNADGAFCHFPFTYNGNTY
KACTSDGRDDGYFWCATTADYDKDQKYGFCPHGRLYTFGGNSDNSPCVFPFIFDGNSYDQ
CTTEGRTDRYKWCATTSNFDVDKKYGYCPSPADAVIAGNSDGELCSFPFTFLGKTYDACT
TDGRSDGQLWCATTSDFDKDKKWGFCPNAGYSIFLVAAHEFGHSLGLDHSTLKDALMYPM
YSYKENFRLLSDDVAGIQHLYGRKSGPTSSTPTSMAPISTSVPITTMATTTTTTATTTTT
TIEPGADICKVDIYDAIASIKKTLHFFKNGNVWKFASAKKVIKGPIPIAKMWPKAPSKID
AAFEDMSTNRVYVFSGRSYWVFSGTSIEPGYPKDIGKLGIDTNVEKIVGAVMKGPNKVQL
FGGQKVWRLDIATEKVDRISPIYDRFQHIPVDANIVFMHKMNTYFLRDKYFWKMDMYNRV
TFVGFIKSNILNCKE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgatcagagttgtgttgagtgttgctttgctggcacacagctccttcagtgcg
ccgatgactcctccattggtgacattcccaggggagcagaacgtgaccgacgccgaaatg
gcaatggactacttgaagaggtttgggtacctgaatttggaaaacacaggcaatgcattg
atcagtctccaatcagccatcataaaaatgcagaaaaccttgggcttgcctgtaacagga
gaactggataagagcacaatcactgccatgaagcagcctcgatgtagtgttcctgatgtt
ctgaactacaaaacatttgatgatgagaaatgggaccacactgatttaacttacagagtt
acaggctacacccctgacttggacccatctgttgttgatgatgcatttgctcgtgccttt
aaattgtggagtgacatcactccattgacattcactcaaatctacagcggcgaagcagac
atcatgattcgatttggcagagaatggcatggagattcatatccatttgacgggtacaat
ggtctcctggcacatgcctacccacctggcaaaaatgtctacggcaacctgcatggtgat
gcacattttgatgatgatgagttctggaccttggggaaaggagcagctgttaaaacccat
ttcggcaatgctgatggagctttctgccactttccatttacatacaatgggaacacatac
aaagcctgtacttcagatgggagagacgatgggtatttttggtgtgcaacgactgcagac
tatgacaaagaccagaaatacggcttctgcccacatggacggctatacacctttggtggt
aacagcgacaattcaccttgcgtgttcccctttatatttgatgggaacagttatgaccag
tgtacaactgagggacgtacggatcgctacaaatggtgtgccaccaccagcaactttgac
gtggataaaaaatatggctactgccccagtccagctgatgctgtgattgctggaaattct
gatggagagttatgttcattccctttcacattccttggcaaaacatacgatgcttgcacc
actgatggcagatcagatgggcagctctggtgtgcaaccaccagtgacttcgacaaagac
aaaaaatggggtttctgtccaaatgctgggtacagcatctttttagtggcagctcatgag
tttggacattccctggggctagatcattccactctcaaagatgctctgatgtacccgatg
tacagctataaagaaaacttcaggctattgagtgatgatgttgcaggaatccagcatctc
tatggacggaaatctggcccaacatcatccacccctacatcaatggcaccaatttcaaca
tctgtgcctattactaccatggccacgaccaccaccaccactgccacaaccactaccacc
acaatcgagccaggtgcagacatctgcaaagtggatatttatgatgcaattgcaagcata
aagaaaacgcttcattttttcaaaaatggaaacgtctggaagtttgcatcagcaaagaaa
gtcatcaagggaccaattccaattgcaaagatgtggccaaaagctccttccaaaattgat
gctgcctttgaagatatgagtacaaatagagtctacgttttctcagggagatcatactgg
gtattttctggcactagtattgagccaggctatcccaaggacatcggcaaactgggcatt
gataccaatgttgaaaagatagttggtgcagttatgaaaggtccaaacaaagtgcaacta
tttggtggacagaaggtttggaggctcgatatagcaacagagaaagttgataggatcagt
ccaatttatgacaggttccagcacattccagttgatgctaatattgtcttcatgcacaaa
atgaacacctacttcctgcgagataagtacttctggaaaatggacatgtacaatcgagtc
acttttgtcggattcatcaagagtaacattctgaattgtaaagaataa
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