Rhincodon typus (whale shark): 109914394
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Entry
109914394 CDS
T06055
Name
(RefSeq) exostosin-1-like
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
rtp01100
Metabolic pathways
Module
rtp_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
109914394
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109914394
Enzymes [BR:
rtp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
109914394
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
109914394
Glycosyltransferases [BR:
rtp01003
]
Glycan extension
O-Glycan
109914394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
109914394
NCBI-ProteinID:
XP_048451602
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All DBs
Position
4:11606893..11779314
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AA seq
490 aa
AA seq
DB search
MQAKKRYLLLSAGAGLLLLIYLAGVRIGRLSAARRQSRRWAAADGSSSAPDRWPEWSNSL
QGFSVGDQPENEEFGQRGSPRHKREINTSVYKGKKCRMDSCFDFSLCHKNGFKVYVYPQQ
KGEKTSESYQNILAAIENSKFYTSDPRQACLFVLSLDTLDRDQLSPQYVHNLKTKVQSLY
LWNNGRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTENFRSNFDVSIPLFSKEHP
RTGGEKGYMLFNNIPPLRKYLLVFKGKRYLTGIGSDTRNALYHVHNAEDIVLLTTCKHGK
DWQKHKDARCDKDNSEYERYDYREMLHNSTFCLVPRGRRLGSFRFLEALQVIVLWDCDKP
LPAKHRWPSTAVPVLVIEGENKVMSSRFLPYDAINTHAVLSLDEDTVLSTTEVDFAFIVW
QSFPERIVGYPARSHFWDSTKERWGYTSKWTNDYSMVLTGAAFYHRALVRPLPLVVYIND
LDMNVGSEIS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgctaccttctgctgtcagccggcgccggtctgctgttgctcatc
tacctggcgggagtgcggatcgggcggctgtccgcagcgaggagacagagccgacggtgg
gctgcggccgatggctcctcgtcggctcccgaccgctggcctgagtggtccaactcgttg
cagggtttctcggtcggggaccagcccgagaatgaagagttcggtcaacgcggctccccc
cggcacaagagggagattaacaccagcgtgtacaagggcaagaagtgccgcatggactct
tgcttcgacttttccctgtgtcacaaaaacggtttcaaagtctacgtctacccgcagcag
aaaggggagaaaacgtccgagagttaccagaacatcctggcagccatcgagaactccaag
ttttatacctcggacccgagacaggcttgtctcttcgtgctaagtttggacactttagat
cgcgatcagctttcgcctcagtacgtacataatctaaaaactaaagttcagagtctgtac
ttgtggaacaatggcaggaaccacttgatttttaatctctattcgggaacttggcccgat
tacacggaagacctgggcttcgatatcggccaggcgatgttagctaaagccagcatcagt
actgaaaattttaggagcaattttgacgtttccataccgctcttttctaaagagcaccca
aggaccggaggagagaagggttatatgcttttcaataacatccctcccttgagaaagtac
ttactggtatttaaagggaaaagatatttgactggcataggctctgataccaggaatgcc
ttatatcatgtccataatgcagaggatattgtcctcttaacgacctgtaaacatggaaaa
gactggcagaaacataaagatgcccgctgtgataaagacaacagtgaatatgaaagatat
gattatcgtgaaatgttgcataattccaccttctgtttggttccacgtggtcgtagattg
ggatctttccggtttctggaggctttacaggttattgtgttatgggactgtgacaaacct
ttgccagccaaacatcggtggccctccactgctgtccctgtattggtaatcgaaggggaa
aataaagttatgagcagtcgttttcttccctatgatgccatcaatacgcatgcagtactt
agccttgatgaagacactgttctttctaccactgaggtggattttgccttcattgtgtgg
caaagcttccctgagagaattgtgggatacccagctcgcagtcatttctgggacagcact
aaggaaagatggggttacacctctaaatggaccaatgattactctatggtcctaacaggc
gctgctttctaccatagggcattggtgcgtcccttgccgcttgttgtgtacattaatgat
ctagacatgaacgtaggaagtgagatcagttaa
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