Rhincodon typus (whale shark): 109914922
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Entry
109914922 CDS
T06055
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy homolog
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04120
Ubiquitin mediated proteolysis
rtp04144
Endocytosis
rtp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109914922
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109914922
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109914922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109914922
04121 Ubiquitin system [BR:
rtp04121
]
109914922
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109914922
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
109914922
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
HECT type E3
109914922
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WW
C2
HECT
Motif
Other DBs
NCBI-GeneID:
109914922
NCBI-ProteinID:
XP_048464485
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Position
19:9456401..9537002
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AA seq
608 aa
AA seq
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MAANGTNSGSASSHTTKSQLGIKVICAKLKENKKNWFGPSPYVEVAVDGQSKKTEKLTNT
HNPKWKQHVTVIVTPFSMITFKVWSHQTLKSDVLLGCATLDVCETLKSNNMKFDGVVIKL
PLTNERDIVDGAGELIVSLDGLTVDPEVLINGNPAAARSNSPNKSSRCGTEAYILNPSSA
NGDAVSQEGSSEMRSADECSMNGKSTPSPSPKPPKPVRPPRPSRPPPAVPSRPVSTAACE
NGYPVPLENGPSSTIPPTINTVPAAVATSEPDASPSNGAVPLNASISPGDRTLNTVNKGP
LPPGWEQRVDQHGRLYFVDHIEKRTTWERPQPLPPGWERRVDERHRIYYVDHITRTTTWQ
RPTVESVRNFEQWQSQRNQLQGAMQQFNQRFIYSYPEQVVPTEFDPLGPLPTGWEKRTDS
NGRMYFVNHLTRTTQWEDPRTEGTLNEKPLPDGWEMRFTVDGVPYFVDHNRRTTTYIDPR
TGKSALSNGPNIAYVRDFRSKVSSFRFWCQQLAAPQHIKITVTRKTLFEDSFQQIMSFNP
QDLRRRLWIIFPGEEGLDYGGVASSDFFFKTIFPCSFNRLDLPPYKSFEQLKEKLLFAIE
ETEGFGQE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaatggcacaaattctggctcagcaagcagccatacaacaaaatcacaactt
ggaataaaagtcatttgcgcaaagctgaaggaaaataagaagaactggtttggacccagt
ccctatgtggaagtggcagttgatggccagtcaaagaaaactgagaagcttaccaataca
cacaaccccaaatggaagcagcatgtcacagtgattgtaacaccattcagcatgatcacg
ttcaaagtttggagtcatcaaacactaaaatcggatgttctccttggttgtgccactctg
gatgtctgtgagacattaaagtcgaataacatgaaatttgatggtgtggttataaagttg
ccactcacaaatgaacgagacattgtggatggggcaggcgagcttattgtgtccttggat
gggttaactgtagatccggaagtcttaattaatggcaaccctgcagctgcaagaagtaac
tccccaaataagagttccaggtgtggcactgaggcgtacatactaaacccatcaagtgca
aacggggatgccgtttctcaagaaggttcatcagaaatgaggtctgctgatgagtgcagc
atgaatggcaaaagtacaccatcaccatctccaaaaccaccaaagccagtgagacctcca
agaccttcacgacctccacctgccgttccatccagacctgtcagcacagcagcctgtgaa
aatggatatccagttcccttagagaatggcccttcttctacaattccacctacgatcaac
actgttcctgcagctgtagcaacgagtgaaccggatgcatcacccagtaatggtgcagta
ccactaaatgcatccatttctcctggtgacagaacattaaatacagtgaacaagggtcca
cttccacctggctgggagcagagggttgatcagcatggcagattgtattttgtagatcac
attgaaaaacgaacaacgtgggaaagaccacagccattgcctccaggctgggaacggagg
gttgatgagaggcacaggatttattatgttgaccacattaccaggacaaccacatggcag
cggcccacagtggagtcagtcaggaactttgagcagtggcagtcacagcgaaatcagctt
cagggagccatgcagcagttcaaccagaggtttatttattcgtatcctgaacaggtggtg
ccaactgaatttgacccacttggccccttgccaactggatgggaaaagagaacagacagt
aatggtcgaatgtattttgtaaaccacttaacacgtaccactcagtgggaagatcctcgg
acagagggcactctcaatgagaaacccttaccagatggatgggaaatgcgctttacagtt
gatggtgttccatactttgtagatcataacagacgaacaacaacttacattgacccacgc
actggaaagtcagcactgtcaaatggtccaaacatagcatatgtgcgtgatttcagatcc
aaagtttcttctttcaggttctggtgtcagcaactggctgcacctcagcacatcaaaata
accgtgacgaggaaaaccttgtttgaggactcatttcagcagattatgagcttcaaccct
caagatttacgaagacgattgtggatcatttttccaggagaggaaggcttagattatgga
ggtgtagcgagttctgattttttttttaaaaccatctttccctgtagttttaatcgtctg
gatttgccaccatacaagagctttgagcaactgaaggaaaagctgttgtttgcaattgaa
gaaactgaaggttttggacaagagtaa
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