Rhincodon typus (whale shark): 109915375
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Entry
109915375 CDS
T06055
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X2
KO
K03174
TNF receptor-associated factor 3
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04620
Toll-like receptor signaling pathway
rtp04621
NOD-like receptor signaling pathway
rtp04622
RIG-I-like receptor signaling pathway
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109915375 (traf3)
04621 NOD-like receptor signaling pathway
109915375 (traf3)
04622 RIG-I-like receptor signaling pathway
109915375 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109915375 (traf3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
Sina_ZnF
zf-C3HC4
zf-TRAF_2
zf-C3HC4_2
Myosin_tail_1
zf-rbx1
Fez1
PI_PP_I
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
109915375
NCBI-ProteinID:
XP_020370578
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All DBs
Position
8:35535417..35611807
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AA seq
575 aa
AA seq
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MATARNIESSAPQLSLMQQANVANVPISRLASLNIEPEDGGFKEKFVLKLENKYKCEYCH
LALCNPKQTECGHRFCESCVRKIIGSPKPVCPVDNVPLFENTIFKDICCKKEVLALHIFC
RNELNGCKKQLPLGNLEGHLLECPHQEVCCARRGCTEMMQRKDLADHLNSSCKYREQTCK
YCRNEIAIVDLKKHEEFDCPSFPVPCPNKCNARILRGELNSHQLQCLNVVMACPFSKYGC
NFQGTNLELKKHEAETMAQHLNSVLMKNGDLENTILELQNKLQEKSKMIDVMSAQISHLE
KEQSKLAQLASKNESRLGYMQKMLASQTDKLMNIDQASQQTYQKQEESVREVKTLEESVD
KLQIQLRQLELAGRAGGMGTGAGNLTALDNQVKRHGSLLSVHDVRLADMDLRFQVLETAS
YNGKLIWKIRDYARRKQEAVSGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSL
FFVVMRGEYDALLPWPFKQKVTLMLLDQAPAKSHLGDAFKPDPNSSSFKKPVGEMNIASG
CPLFVAQTVLESGTYIKDDTIFIKVVVDTSDLPDP
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcaagaaacatagagtcatcagccccgcaactgtccctaatgcagcaggcc
aatgtggctaatgttccgattagcaggctggcatctctaaacattgaaccagaagatggg
ggcttcaaggagaagtttgtgctgaaactggaaaataaatacaaatgtgaatattgtcat
cttgcactctgcaatcccaaacagactgagtgtggccacagattctgtgaaagttgtgta
aggaaaatcattgggagtccaaaacccgtttgtccagtggataatgtgcctttatttgag
aatacgattttcaaggacatctgctgtaaaaaagaagttcttgcacttcacatcttctgt
aggaatgagttaaatggctgcaagaaacagctacctcttggaaatcttgagggtcactta
cttgaatgtcctcaccaggaagtctgctgtgcacgcaggggatgcacagaaatgatgcaa
aggaaagatttagctgaccatttgaattcaagctgtaaatatcgagaacaaacctgtaaa
tactgcaggaacgagattgctattgttgacttaaaaaaacatgaagagtttgactgtcca
tcgttcccagtgccatgccccaataagtgcaatgctcgtattctgaggggagagttaaac
agtcatcagttgcagtgtctcaatgtggttatggcttgccctttctctaagtatggatgc
aacttccaaggaaccaacctggaacttaaaaagcacgaagctgaaactatggctcaacat
ttgaactctgtgttgatgaagaatggagatcttgaaaatacgattttagaacttcagaat
aagttgcaggaaaagtctaaaatgattgacgttatgtcagctcagataagccacttggag
aaggaacaaagtaaattagcacagctcgcaagtaagaatgaaagtcggcttggatacatg
cagaaaatgttagctagtcagacagataaattgatgaatattgatcaagcatcacaacag
acataccagaaacaggaggagtctgtgagagaggtgaaaactttggaagaatctgtagac
aagctccaaatccaactgagacagctggaactagcgggcagagctggtgggatgggcaca
ggagcaggaaacctgactgcattggataaccaagtaaaaagacatggcagcctactcagt
gtacatgatgtgcgcttagcagatatggacctacgctttcaagttctcgaaactgcaagc
tacaatggaaaactgatttggaaaatccgagattacgctcgccgaaaacaggaagccgtt
agtggaaagacattgtccttgtatagccaaccgttttacactggatattttggctacaaa
atgtgtgctcgggtttacctcaacggagatggcatgggcaaaggaactcacttatcactg
ttttttgtcgttatgcggggagagtatgacgcactgttaccgtggccttttaaacagaaa
gtaacgttgatgctattagaccaagcgccggcaaaaagccatttaggcgatgcctttaag
ccagatcccaatagtagtagttttaagaagccagtgggagagatgaatattgcttcaggc
tgcccgctgtttgttgcacagactgtcttggaaagtgggacatatattaaagatgacact
atcttcataaaagtagttgttgatacctcagatttgccagatccatga
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