Rhincodon typus (whale shark): 109915507
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Entry
109915507 CDS
T06055
Name
(RefSeq) cystathionine beta-synthase-like
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00260
Glycine, serine and threonine metabolism
rtp00270
Cysteine and methionine metabolism
rtp00670
One carbon pool by folate
rtp01100
Metabolic pathways
rtp01230
Biosynthesis of amino acids
Module
rtp_M00035
Methionine degradation
rtp_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
109915507
00270 Cysteine and methionine metabolism
109915507
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
109915507
Enzymes [BR:
rtp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
109915507
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Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
SDH_alpha
Motif
Other DBs
NCBI-GeneID:
109915507
NCBI-ProteinID:
XP_020370728
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Position
32:22992289..23032430
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AA seq
531 aa
AA seq
DB search
MMTSEQANKMKENQMQGSQQARMPDLPSRCTWSLGMPPSKSPHTQDELKDSSKILPNVLY
KIGNTPLIRINNIAKEYGLKCELLAKCEFFSAGGSIKDRIALRMIEDAEKQGVLNSGDVI
IEPTSGNTGIGLGLVAAVKGYRCIIVMPEKMSLEKVNVLKALGAEVVRTPNAANLNSPDS
HIAMAWKLKNEIPNSHVFDQYQNASNPLAHYDITAEEILDQCDGQVDVVVMGAGTGGTIT
GIARKFKEKCPNCKIIAVDPAGSTMAEPEELNFPDQISYEVEGIGHRFIPTVLDRKVIDK
WLKTNDEESFAMARMLIKKEGLLCGGSSGSAMCGALRVAKDLKEGQRCVVILPDSVRNYM
SKFLSDDWMEEKGFLHVECDQKSWWNEPISQMKLPPTLTVLPTTSCQDIIQILKEGSMNN
AVVIDSNGTVLGLVTLGNIMSLVHEGKLQLTDLVSKAIYQQFQKVKLSDTLGKILQILTL
NHFALIVQEQVHSTGSGECGKREVVHGVVTFNDLISFVTDEKKMMGTAKKY
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatgacttctgaacaggccaacaaaatgaaagagaatcaaatgcagggaagtcagcag
gcaagaatgccagaccttccatcgcgctgcacctggagcctggggatgccaccatccaaa
tctccacacactcaagatgagctaaaggattcatccaagatcttgcctaacgtcctctat
aaaattggtaacactcccctcatccgaattaacaatattgcgaaagaatatggacttaaa
tgtgagctattggcaaagtgtgagttcttcagtgctggtggaagcattaaggaccgcatt
gctttacggatgattgaagatgctgagaaacaaggggttctgaattcaggtgatgtcatc
attgaaccaacctctggtaacacaggcattggtttgggcttggtggctgctgtgaaagga
tatcgttgcattattgtcatgccagagaagatgagcttagagaaggtcaatgtgttaaaa
gccttgggagctgaagtggtgaggacaccaaatgctgcaaacctcaacagccctgactct
catattgcaatggcctggaaactgaagaatgagattccaaactcccatgtgtttgatcag
tatcaaaatgctagcaatccattagctcattacgacatcacagcagaagaaattctggat
caatgtgatggacaagttgatgttgtggtgatgggtgctggaactggcggtaccatcaca
ggcatagcacgaaaattcaaggaaaaatgtcccaactgtaagatcattgctgttgaccct
gcaggttcaaccatggctgaaccagaagaactgaactttccagaccagatttcatatgaa
gtggaaggaattggccatagatttataccaacagtattggacagaaaagtgattgacaaa
tggttgaagactaatgatgaggaaagttttgcaatggctcggatgttgatcaaaaaagaa
ggattgctgtgtggtggaagctctggtagtgccatgtgtggagctttaagagtggcaaaa
gatctgaaagaaggacagcgctgtgtagtgattctcccggattctgttcgaaattacatg
tcaaaatttcttagtgatgattggatggaagagaaagggttcctgcatgtggaatgtgac
caaaaaagctggtggaatgaaccaatcagtcagatgaagcttccaccaactttgactgtc
cttcccacaaccagttgccaggacatcattcagattctcaaagagggtagcatgaacaat
gcagtggtcattgactccaatgggacagttctgggtttggtcaccctaggaaatattatg
tctttagttcatgaaggaaaactgcagctcactgatctggtgtctaaagccatttaccag
cagttccaaaaggtgaagttaagtgacactcttgggaaaatcttgcagattttgacactg
aatcactttgccttaattgttcaagaacaagttcacagtactggcagtggcgaatgtgga
aagagagaagtggtgcatggcgtggtaacatttaatgatctgataagctttgtaacagac
gagaagaaaatgatggggacagcaaaaaaatattaa
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