Rhincodon typus (whale shark): 109915658
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Entry
109915658 CDS
T06055
Symbol
ap4b1
Name
(RefSeq) AP-4 complex subunit beta-1 isoform X1
KO
K12401
AP-4 complex subunit beta-1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
109915658 (ap4b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109915658 (ap4b1)
Membrane trafficking [BR:
rtp04131
]
Endosome - Golgi transport
Others
AP-4 complex
109915658 (ap4b1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT
HEAT_2
PDS5
HEAT_MROH2B_C
HEAT_IPO9_c
Tscrpt_reg_Tri6
Motif
Other DBs
NCBI-GeneID:
109915658
NCBI-ProteinID:
XP_048468139
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All DBs
Position
25:36212977..36224413
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AA seq
629 aa
AA seq
DB search
MSDLFFFRMPGISEYIQQPVLNGLRDKASYVRRAAVLGCAKMQTLQGDTEVDGAVVNELY
AMLRDPDPIVMVNCLRALEEILKHEGGVVINKPIAHHLLNRMKDLDHWGQSEVLAFLVRY
KTRTEDEVFTILNVLDDFLKSSQPNVVMATTKLFLLLSEDFPNVQMDILERVKGPLLAIC
TSECHELCFLGLCHAREILRSSPGHFSGHYKKFFCMYSEPNYIKYQKMEILRNLVNDENV
QQILEELQTYCTDVSVELAQMAILNIGRIARMYSERCVVILKGLLGLKQEHITSAVIQTF
RDLVWLCPQCTATVCQALLGCEENIQDSEGKQALIWLLGMHGEQVPNAPYVLEEFVDNVK
METSATVKLELITAMVRLFLSRPAECQDVLGRLLHYVIEEELDMAVRDRGLLYYRLLQQG
VEEVKRVVCGPRSDPSLDVISGQAKEAVSTWSKDFNTLIPIYGQEQWDRLTAQKGDSLEI
LQVSAVKSDEKDTSPEQREKMAADSGSVSLETSAHLSPEQFEEYWTRLEPAKVVTVDWHK
DSCPDAIQTAFQFVHIQPVAISRAGVQPWKAYLFAKNDTGSLFLIELLTVKGKRDMQITV
KQENSSEPLLNHFITVVKSVIQALGETKS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttgttctttttcagaatgccaggtataagtgagtatattcaacaaccagta
ctaaatggattaagagataaagcttcctacgtcaggcgagcagcagtcctgggatgtgct
aaaatgcagactcttcaaggggatacagaagttgatggggctgtggtaaatgagctgtat
gctatgctgcgtgacccagatcctattgtcatggtcaattgcttgagagcattggaggaa
atcctgaaacatgaaggaggcgtggtcatcaacaagccaatagcacatcaccttttaaac
agaatgaaagacttggatcactgggggcagagtgaagtgctggcattcctggttcgctac
aagacccgaactgaagacgaagtgttcacaattctgaatgtactcgatgactttctcaaa
agcagtcaacctaatgttgtcatggcgaccaccaaactatttcttctgctgtctgaagat
ttccccaacgtgcagatggatattctggaacgagtgaaagggccgctgctcgctatctgc
acatcagagtgtcacgagctgtgtttcctgggtttgtgccatgcacgggagatccttcgc
agctcacctgggcatttcagtggtcactacaagaaattcttctgtatgtactctgaaccg
aattacattaaataccagaaaatggaaatcctcaggaacttggtgaacgatgagaatgtc
cagcagatacttgaggagcttcagacctattgcacagatgtttctgtagagctagctcag
atggccattttaaatataggtcgaattgcacggatgtatagtgaaaggtgtgtggttatt
ttgaaagggctactgggcctcaagcaggaacatattacatcagctgtcattcaaacattt
cgtgatcttgtatggctgtgtccccagtgtacagcgactgtctgccaggcactactaggc
tgtgaggagaacatccaggatagtgaggggaagcaagctctgatctggctccttgggatg
cacggagagcaggttcccaatgctccctacgtcttggaagaatttgtggacaatgtgaaa
atggagacctctgcaacagtgaagctggagctgatcacagcgatggtgcgcctgttcctg
agtcgcccggctgaatgtcaggatgtgctgggaagactacttcattatgttattgaggag
gagttagacatggctgtgcgcgatcgcggactgttatattatcggctgcttcagcaagga
gttgaagaggtcaagcgggtagtctgtggaccaagatctgatccatccttggatgtaata
agtggtcaagctaaagaggcagtcagtacctggtccaaagactttaacacactaatacca
atctatggccaagaacagtgggatcgcttaacagcacagaaaggggactccttagaaatc
ctgcaggtgtcagcagtaaagtcagatgaaaaagacacaagcccagaacaaagagaaaag
atggctgcagactctggatcagtcagtttggagaccagtgcccacctgtcgccggagcag
tttgaggagtactggactcgtctggaacctgctaaagttgtgactgtggactggcacaaa
gactcatgccctgatgccatccaaactgcttttcagtttgttcacatccagccggttgca
attagccgggcaggagtgcaaccgtggaaagcctatctgtttgccaaaaatgacactggg
tcattgtttttaattgaactcttaactgtgaagggcaagagggacatgcaaattactgtt
aagcaagagaatagcagcgaaccgttgctcaaccacttcatcactgttgttaagtctgta
atacaggctctgggtgagactaaaagttag
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