KEGG   Rhincodon typus (whale shark): 109916423
Entry
109916423         CDS       T06055                                 
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
  KO
K04359  platelet-derived growth factor subunit A
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04010  MAPK signaling pathway
rtp04020  Calcium signaling pathway
rtp04510  Focal adhesion
rtp04540  Gap junction
rtp04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    109916423
   04020 Calcium signaling pathway
    109916423
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109916423
   04540 Gap junction
    109916423
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    109916423
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:rtp04052]
    109916423
   00536 Glycosaminoglycan binding proteins [BR:rtp00536]
    109916423
Cytokines and neuropeptides [BR:rtp04052]
 Cytokines
  Growth factors (RTK binding)
   109916423
Glycosaminoglycan binding proteins [BR:rtp00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   109916423
SSDB
Motif
Pfam: PDGF_N PDGF
Other DBs
NCBI-GeneID: 109916423
NCBI-ProteinID: XP_048465505
LinkDB
Position
21:16953734..16988022
AA seq 227 aa
MRATVYFILGFCYLTCARTEEAEFPPELLEKLAHSDITSIRDLQRLLEIESVGDDDHTES
NLRSHSINAVKHEYTKRSAPVRRRRSIEEAVPAVCKTRTVIYEIPRSQIDPTSANFLIWP
ACVEVRRCTGCCNTGSVKCQPSRIHHRSVKVAKVEYIRRKPRLKEVVVRLEEHLECMCTL
LHSNSEFREHEGPFTSPKRFKGRNSEKIKKRKRKKLILAPDKDVFPT
NT seq 684 nt   +upstreamnt  +downstreamnt
atgagagccacggtttattttattctgggcttttgctacctgacctgtgcgcgtacagag
gaagctgaatttcccccagaattgcttgagaagctggcacacagtgatattaccagcatc
cgcgatcttcagcgcctcctggagattgaatccgtaggggatgatgatcacacagaatct
aatttaaggtctcacagtattaatgcagtaaaacatgagtacacaaagcgttcagcacct
gtacgcagaaggcgaagtattgaagaagctgttcctgcagtgtgtaaaacaaggactgtc
atttatgaaatacctcgcagtcagatagatcccacctctgccaacttcctgatatggcct
gcttgtgtggaggtcagacgctgcacaggctgttgcaatactggcagcgtcaaatgccag
ccctcccggatacatcatcgaagtgtcaaggttgcaaaagtggagtatataaggcgcaag
cccagattaaaggaggtcgtagtcaggttagaagagcacctggaatgtatgtgcacatta
ctacattctaattcagaattcagagaacatgaagggcctttcaccagcccaaagcgcttt
aaaggaagaaatagtgaaaaaattaaaaaacggaagcgtaaaaagttaatactggcacct
gacaaggatgtgtttccaacataa

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