Rhincodon typus (whale shark): 109916623
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Entry
109916623 CDS
T06055
Name
(RefSeq) lactosylceramide 4-alpha-galactosyltransferase
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rtp00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
109916623
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
109916623
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109916623
Enzymes [BR:
rtp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
109916623
Glycosyltransferases [BR:
rtp01003
]
Glycan extension
P blood group
109916623
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
109916623
NCBI-ProteinID:
XP_048463774
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All DBs
Position
18:11217802..11236615
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AA seq
373 aa
AA seq
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MVTKMSQFSIKSSNDKQKQQQNFIKRYLVSKNKAKNNLWCKLWIYSLILLKLVSLTLMLY
YRGGAQSLPIKYRLANNIKCPSIDFNNGTDGDYHAYDNTTIFFVEVSDRTNPTFLSLCSV
ESAARSHPRAKIVFYMKGLSAAKAKTFGISLLNCFPNVEIRPLDLKDLFADTPLSLWYSR
LHQWWQPYLIPTIADACRLVLLWKYGGIYLDTDIIVLKNLFNLTNSLGKEERYLLNTAFL
SFDRGHDFIGNCLKDFVEHFNAWIWGHQGPQLVTRVLKKWCQKKSIAKIQQCKGVRVLPP
EAFYPIRWQDWKKYFEVMSRSEAQRLLKNSYAVHIWNKMSHGTSFSRGSKVMIDQLCSVY
CPISYQIMRWQQN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggttacaaaaatgagccaattttccataaagtcatctaatgacaagcagaagcagcag
cagaatttcattaagagatatttagtatcaaagaataaagcaaaaaataatttatggtgt
aagttatggatatatagtttgattttgctcaaattggtatcgttgacattaatgctgtac
tacagaggtggtgcccaaagtctacctataaaatataggttagccaataacatcaaatgt
ccatccattgacttcaataatggtacagatggtgactaccatgcttacgataatacaact
attttctttgtggaggtctctgaccgaactaatcccacttttttgtccttgtgttctgtg
gaatctgcagcaagatctcatcccagggccaagattgtcttttacatgaagggtctttca
gctgcaaaagctaaaacctttgggatttccttgctaaactgttttcctaatgttgagatc
aggccattagacctgaaagatcttttcgcagacactccattgtctttgtggtattccaga
ctgcaccagtggtggcaaccttatctaataccaaccatcgctgatgcctgcagacttgtc
cttttgtggaaatacggtgggatttacttagacacggacattattgttctcaaaaatctg
ttcaatctcaccaacagccttggcaaagaagaacggtatttactgaatacagcctttttg
tcttttgatcggggccatgactttattggaaactgtttgaaggattttgttgagcacttc
aatgcatggatctggggccaccaaggaccccagttagtaacccgtgttcttaaaaagtgg
tgtcaaaagaagagcatagccaagattcaacagtgcaaaggagtgagggtgttacctcct
gaggctttctatccaattcgttggcaggactggaaaaaatactttgaggtaatgagcagg
tctgaggctcagaggttactgaaaaattcttatgcggtacatatatggaataaaatgagt
catggaacttcgttttcgaggggatcgaaagtgatgattgaccaactgtgctcagtttac
tgtcctatctcgtatcaaataatgaggtggcagcaaaactag
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