Rhincodon typus (whale shark): 109918014
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Entry
109918014 CDS
T06055
Symbol
ptcd3
Name
(RefSeq) pentatricopeptide repeat domain-containing protein 3, mitochondrial
KO
K17659
pentatricopeptide repeat domain-containing protein 3
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109918014 (ptcd3)
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
109918014 (ptcd3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_3
PPR_2
PPR_long
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
109918014
NCBI-ProteinID:
XP_048454308
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Position
1:complement(21201558..21494269)
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AA seq
352 aa
AA seq
DB search
MAEQKVQPNLLTFNSAMKSLRKCGSIAKGLSIQILNEMKYLNIEPSLATFDHLLAIFYKP
GAVTRPHTDIIFEVLDEIEGKHFEARDPDDVNFFISAMRLCLDLKDLELAYRLHKTLETG
NNWVLLGDSYQQSIYYGRFFSLLCTMESIDVVLKWYKALIPSLYYPNVQGMRDLLQALDT
ENHLHLIPNVWKDIKQLGHSNKQDLVEEVLELMSRDKHSPQLQAAFSETALDIKSVYKRD
QFRNMQWTSTSLGNVTALFLRGGRTQDAWEMLQLFKTNNRVPGKELLDEFLDHAKESNNK
TLAIDLVKLAGTFSLPATSELFERVMIEYQLTDEEKKSLEELDATSSDSDRE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaaaaggtgcagccaaacttgttaacttttaattctgcaatgaagagtctc
cgaaagtgtggttcaatcgcaaaaggactttccatccaaatacttaatgaaatgaaatat
ctaaatatagaaccaagtttggctacctttgatcatctacttgctatattctataaacct
ggcgcagttacccgaccgcacactgacatcatctttgaggtgcttgatgaaatagagggg
aagcattttgaggcccgggatcctgatgatgtgaacttctttatcagtgctatgaggctg
tgtttggatttgaaagaccttgaattggcttacagattgcacaagacacttgaaactgga
aacaactgggtattattgggcgattcttatcagcaaagtatttattatgggagattcttt
agcctcttatgcacaatggagagcattgacgtggttctcaagtggtataaagccctcatt
ccatcgctctactaccccaatgtgcaaggaatgagggatctgctgcaggcgttggacact
gaaaaccacttgcacctgattccaaatgtctggaaagacattaagcaacttggtcacagt
aataagcaggatcttgtggaggaggtccttgaactgatgagtcgtgacaaacacagtcca
cagttgcaagctgcattttctgagactgcactggacataaagtctgtatataaacgggac
cagttccgtaatatgcaatggacatctacctctttaggaaatgtcactgctctgttcctg
agaggaggccgaactcaagatgcttgggagatgctgcaactttttaaaactaacaacagg
gttcctggtaaagaactattggatgagtttttggatcatgctaaggaaagcaataacaag
actctggctattgacttggtaaaactggccgggacattcagtttgcctgcaacatcagag
ctgtttgagcgcgtaatgattgagtatcaactgacggatgaagagaaaaaatcactggaa
gagttggatgccaccagcagtgatagtgaccgagaataa
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