Rhincodon typus (whale shark): 109918216
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Entry
109918216 CDS
T06055
Symbol
cxcr4b
Name
(RefSeq) C-X-C chemokine receptor type 4b
KO
K04189
C-X-C chemokine receptor type 4
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03250
Viral life cycle - HIV-1
rtp03260
Virion - Human immunodeficiency virus
rtp04020
Calcium signaling pathway
rtp04060
Cytokine-cytokine receptor interaction
rtp04144
Endocytosis
rtp04672
Intestinal immune network for IgA production
rtp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109918216 (cxcr4b)
03260 Virion - Human immunodeficiency virus
109918216 (cxcr4b)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109918216 (cxcr4b)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109918216 (cxcr4b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109918216 (cxcr4b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
109918216 (cxcr4b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
109918216 (cxcr4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
109918216 (cxcr4b)
04050 Cytokine receptors [BR:
rtp04050
]
109918216 (cxcr4b)
04090 CD molecules [BR:
rtp04090
]
109918216 (cxcr4b)
G protein-coupled receptors [BR:
rtp04030
]
Rhodopsin family
Chemokine
CXC Chemokine
109918216 (cxcr4b)
Cytokine receptors [BR:
rtp04050
]
Chemokine receptors
CXC Chemokine
109918216 (cxcr4b)
CD molecules [BR:
rtp04090
]
Proteins
109918216 (cxcr4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
109918216
NCBI-ProteinID:
XP_020373708
LinkDB
All DBs
Position
7:complement(67927519..67930769)
Genome browser
AA seq
366 aa
AA seq
DB search
MTEDSEFDEMYYRLAYDANYPNDTDVYNYTYPEGALCDGENAYFKSIFLPCVYSLVFVLG
VVGNGLVVVIMGYHGRVRTMTDKYRLHLSVADLLFVLTLPFWSIDASLSWYFGDAMCKIV
HIIYTVNLYSSVLILAFISLDRYYAVVHATNSTGPRKLLADRLVYVGVWLPAILLTVPDI
VFAKTRNLDDRVVCERIYPDGTYQFWRMSFRIQGIAVGFVLPALVILICYCIIISRLSRS
TGLQKRKALKITIILIVTFFCCWLPYYIVISIDTVMLMKDSAYSCELEQIVITSMAITEA
IAFFHCCLNPILYAFVGVNFKTYTRRVFNHSDTRCSSLKKLKSKDRRGAHPSVSTESESS
SLQSTC
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagattcagagttcgatgaaatgtattatcgcctggcttatgatgccaattat
cccaatgatactgacgtgtacaattacacatatccagagggtgccttatgcgatggagaa
aacgcgtactttaaaagcatcttcttaccgtgtgtctactcactggtgtttgtgctgggg
gtggtgggcaatggcctggtggtggtcatcatgggctaccatggaagagtgcgcaccatg
acggacaaatacaggctgcacttgtcggtggcggatttgctgtttgtcttgaccctgccc
ttctggtctatcgacgcgagcctcagttggtacttcggagacgcgatgtgcaagatcgtg
cacatcatctacaccgtcaatttgtacagcagcgtgttaattctcgccttcatcagcctg
gaccgctactatgcggtggtgcatgcgaccaacagcacgggaccgcggaagctgctggct
gatcggttagtctatgtgggcgtctggttaccagccattctgctcactgtgcccgacatt
gtgtttgctaaaaccagaaatctcgacgacagggtggtgtgtgagcgcatttaccccgat
ggcacgtaccagttctggaggatgagtttccgaatccaaggcatcgcggtgggcttcgtt
ctgcccgctctggtcatcctcatctgctactgtatcattatttcccggctgtcccgttcc
accggcttgcagaagcgcaaagccctgaaaatcaccatcatcctgattgtcaccttcttc
tgctgctggctaccctattacatcgtcatctccattgacacggtgatgctcatgaaagac
agcgcctactcctgcgagctggagcaaattgtcatcacctcgatggccatcactgaagcc
atcgccttctttcactgttgcctcaatcccattctgtacgcttttgtcggggttaacttc
aaaacttacactcgaagagtcttcaatcactctgacaccagatgctcctctcttaagaaa
ctcaaaagcaaagacagacgaggagcccatccgtcagtttctaccgagtctgagtcttcc
agtcttcagtcaacttgctaa
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