Rhincodon typus (whale shark): 109918799
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Entry
109918799 CDS
T06055
Symbol
egr2b
Name
(RefSeq) early growth response protein 2b
KO
K12496
early growth response protein 2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109918799 (egr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109918799 (egr2b)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
109918799 (egr2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3446
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2HC_2
C2CH-3rd_BIRD-IDD
zf-BED
zf-C2H2_15
zf-C2H2_STOP2_C
zf-C2H2_ZNF462_1st
DUF7565
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
109918799
NCBI-ProteinID:
XP_020374331
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Position
20:5438207..5441531
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AA seq
420 aa
AA seq
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MTAKAVEKIPLSLGGLFHQIPDNMYSADDLSSLPASVTIFPNQELAPYEQIPSDMINVDM
SSDKRALELPYPNNYHPASGPRGQSFTYMGKFSIDSQCTGANWSPDGIINIVSAGIFGVP
PSTSSSASSSSSSSSSSASPNPLSSTLSCTMAQNASDMEHMYSPPPPYSCGEIYQEPAPF
FSTSSCYPPPPPPPSYPSSKPVVENPLFPILPEYSSIFQPQHSHRELNPGVERKPFSCPG
DTVRMAPALTPLSTIRNFTLGNPTAEGPRLPSAYGGQNLPLRPIRLRKYPNRPSKTPVHE
RPYPCPAEGCDRRFSRSDELTRHIRIHTGHKPFQCRICMRNFSRSDHLTTHIRTHTGEKP
FSCDFCGRKFARSDERKRHTKIHLRQKEKRLAGDKPPGPAVGSTVCSGGSPLAVCPPRTV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgaaagcggtggagaagatcccgctgtctctgggaggcctcttccatcagata
cccgacaacatgtactcagcggacgatctcagttcgctgcccgcgtccgtcacgatcttc
cccaaccaggagctggccccatacgagcagattccctcagacatgattaatgtggacatg
agcagcgacaagagagcgctggaattaccttaccccaacaactaccacccagcctctggc
ccccgaggacagtcttttacctacatgggcaagttctccattgactctcaatgtaccggc
gccaactggagtcccgacggtatcatcaacatcgtgagtgctgggattttcggagtccct
ccatctacctcctcctccgcatcctcctcttcatcctcctcctcttcctctgcctccccg
aaccctctctccagcaccctcagttgcacgatggcacagaatgcgagcgatatggagcac
atgtactcgcctccccctccttacagctgcggggagatttaccaggagccggctcccttc
ttcagtacctccagttgctaccctcctcctcctccacctccgagttacccgtcgtccaag
ccggtggtagagaaccccctgttccccatcctgccggagtacagtagcatcttccagcct
cagcattcgcacagagagctgaacccgggagtggagcgcaagcctttctcctgccccggg
gacactgtcagaatggctccagctctcactcccctgtccaccatccggaacttcaccctg
ggtaacccgacagcggaaggacccaggctgcccagcgcttacggcggacagaacctgccc
ctgcgacccatccggctccgcaagtacccgaaccgacccagcaagaccccggtccacgag
aggccttacccgtgccccgccgagggttgcgaccgccgcttctcccgctcggacgagctg
acacgccacatccgcatccacaccggccacaagccgttccagtgccgcatctgcatgagg
aacttcagccggagcgaccacctcaccacccacatccgcactcacaccggcgagaaaccc
ttctcctgcgacttctgcggcaggaaattcgcccgcagcgacgagcgcaagaggcacacc
aagatccacctgcggcagaaagagaagagactggcgggggacaagcctccaggacccgcg
gtgggatctactgtctgctccgggggcagcccgctcgctgtctgtccgcccaggacagtg
tga
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