Rhincodon typus (whale shark): 109919537
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Entry
109919537 CDS
T06055
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04120
Ubiquitin mediated proteolysis
rtp04210
Apoptosis
rtp04217
Necroptosis
rtp04510
Focal adhesion
rtp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109919537
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109919537
04217 Necroptosis
109919537
09144 Cellular community - eukaryotes
04510 Focal adhesion
109919537
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109919537
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109919537
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109919537
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109919537
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109919537
Peptidases and inhibitors [BR:
rtp01002
]
Peptidase inhibitors
Family I32: IAP family
109919537
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109919537
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
109919537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC
Motif
Other DBs
NCBI-GeneID:
109919537
NCBI-ProteinID:
XP_048460961
LinkDB
All DBs
Position
14:26717901..26729966
Genome browser
AA seq
436 aa
AA seq
DB search
MDITTDCKQDLSNEIYRLGTFINFPSDSPVSEATLARAGFFYTGIKDQVKCFSCGGAVDN
WQHGDSAVRKHRQLFPACPFINGSSLNEQIANSHCLVTSHDPENSDQAAASSNHALENGP
CNQLNVVHQYCNQILSNRVKRKSIEDLSHLRPKNPAMCSEEARLSTFTKWPSYGIVTPRE
LAKAGLYYTYKDDQVQCFCCGGLMKNWEPGDRAMSEHKRHFPMCAFVSGRFIGNIPIDAN
CSETIDVNQSVNEPKANTSDLPKHPDKQTFDSRLQTFKCQISFPLNIADLARAGFYSTGD
DDNVKCFHCDGGLRNWESSDEAWEQHAKWFPGCAFLIEQKGRDFVNDVQLKKLYSNSKVK
GCFSKTNPSVDECKELHVWLTVSGNEMIGNSSKMKSSLNFAGHKVGNCSILFSLKPETLH
CFRRTGSGNSGWGPTG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggatattacaacagattgtaaacaagatctctcaaatgaaatctatagacttggaaca
tttatcaactttccatctgattccccagtatctgaagcaacattagccagagcaggtttc
ttttacactggtatcaaagaccaggttaaatgtttcagctgtggtggtgcagttgataac
tggcaacatggagattctgctgtacgaaaacacaggcagctatttccagcttgtccgttt
attaatggttcaagcctgaatgaacaaattgcaaactctcattgtttagtcacatctcat
gaccctgaaaactctgaccaagcagctgcaagtagtaatcatgcattggaaaatggccct
tgcaaccagttgaatgttgtccaccaatattgtaatcaaattctcagcaatcgtgtgaaa
aggaagagtattgaagacctttcgcacctacgacccaaaaatcctgccatgtgcagtgaa
gaagccagactttctacctttaccaagtggccgagttatgggattgtaacaccaagagaa
cttgctaaagcaggactttattatacatacaaagatgatcaagtacaatgcttttgttgt
ggagggttaatgaaaaactgggaacctggagatcgagcaatgtctgaacacaagaggcat
tttccaatgtgtgcttttgtttcagggcgttttattggaaatataccaattgatgcaaat
tgcagtgaaacaatagatgttaaccagtctgtaaatgaaccaaaagcaaatacttctgat
ttacctaagcatccagacaagcagacatttgattcacgtcttcaaaccttcaaatgccaa
ataagttttccacttaatattgctgatcttgcaagagctggattttatagcacaggtgac
gacgacaatgtgaagtgttttcactgtgatggaggcctcagaaattgggagtcttctgat
gaagcctgggagcaacatgccaagtggtttccagggtgtgctttcctgatagaacagaaa
ggccgtgactttgtcaatgatgttcagttgaagaaattgtactccaactccaaagttaaa
ggctgtttctccaaaacaaatcccagtgtggatgaatgtaaagagttgcatgtgtggctt
actgtcagtggtaatgaaatgattggaaactcatcaaaaatgaaatccagcttaaatttt
gctggacataaggttggcaactgttcaatacttttctctctgaaaccggaaactctgcac
tgcttcaggagaacaggcagtggtaattcaggatggggccctacagggtaa
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