Rhincodon typus (whale shark): 109920132
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Entry
109920132 CDS
T06055
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04140
Autophagy - animal
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109920132 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109920132 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109920132 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109920132 (plekhm1)
Membrane trafficking [BR:
rtp04131
]
SNARE
SNARE associated proteins
Others
109920132 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
109920132 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_11
CsgA
Motif
Other DBs
NCBI-GeneID:
109920132
NCBI-ProteinID:
XP_048470766
LinkDB
All DBs
Position
30:complement(9425016..9483097)
Genome browser
AA seq
1094 aa
AA seq
DB search
MISTHTLENLAAHREVKQRIKKKLASSLKCLQKRYVNSDNVVTSDDSDANVLCSVLESVF
VHGLKSKYVKTDGGKRGRNRVPLPEPVFWTLLKTVTHRNVVTELENLNFINTDIGRCRAW
VRLALNDGLMECYLISLFRERDNLCDFYHPVALLLDSEDSEVLLSYLQGLSSLSFALSYK
SAVLNEWTTTPLALAGLCSASELPEPSLPDFSESRRRGSWDSVSQSSGSDIVDVIHSSST
TAHSSHLSGKLKLTSSNLSLETIGSSQLSSSLNSDGLLQSNGMKSPDQTTEELWSCDTDK
GIASAESSNKSLQEMPDELSRGDQTLVFTEHNFDISVIQLELPSKPPEEIVLTNAQSDEH
VANLHTCDGEANPRTTESHSQVESSPPFCIRASTLQCPVSADESDTKTTPALADEVLNTG
HAEELSHTNVTRNSQSIVCQDQQVKYDQNYTEAAEQVSVVGEITCGTDEVDKLGMLGSQL
TEPGDNHKRSSWISDDDICKPSPRRVLSKSIRESSSECSVSSRPVNGSSGQLNTHAQSVS
NFSQCKHSQGDSSFKVTHRRKAGISNPFRGLLKLGNLERRGHVGIWKEYYCELSPFEFRL
YQNDDDRNCYDNCSLLRCESVGPAHTDGRFELVLAGKRLCLRAPSQDEAEDWIDRIREAL
MKCRPHQTPKQEAKYTDNSVSEISHNMSTPYTPQSVEQPNCEKENGFQQVFNWSSQAEPQ
LDAIKESVLYQLTEKSWMPYIFSLSLEALKCFQFQDQQKILCDSYRIETFKDIIPDTALG
SPAYFKLITSKITLRLRAESAAEAKSWRELIRAVLSSFWEAEEDALAANVTIEKNERRLR
ELGLGEHINLLQCLTVVPVEKGLDAQEFRCAGCRQQIGFSFGKAKLCAFSSLYYCEMCHQ
DTLIIIPSRMIHNWDLVKKGVSNVAAKFLQQIQNEPFIDINLINASLYQYIEQMAQARKS
RKRLKLLEDYLLTCRSGAVQELYRKLEQKKYLVESPDLYSVSDLQQTAHGVFEAFLQHAI
QYATNHVYMCDLCTQRGFICQICNSNDIIFPFEFETTSRCKECKTVFHKDCKAGVLSCPR
CVRKQKYQQSKMKY
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgatttctacgcacacattggaaaacttagcggcacacagagaagttaaacagcggata
aagaagaaactggcaagttccctgaagtgcttacagaaacgttacgtaaactcggacaat
gtggttaccagtgatgacagtgatgcaaatgttctctgctctgtcttggagtccgtgttt
gtgcacggcttgaaatcaaagtatgtcaaaacagatggaggaaaacgaggacgaaataga
gtacctctcccagagcctgtcttttggactctgcttaaaactgtcactcaccgaaatgtg
gtgactgagctggaaaatttgaactttattaacactgacattggacgatgtcgagcatgg
gtcaggcttgcactgaatgatggcctgatggaatgttacctaatatctctattccgtgaa
cgggacaacctgtgtgacttctaccaccctgtggccttactgctcgattcagaggatagt
gaagttttattgagctatctacaaggtctatcatctctttcgtttgcactgtcttataaa
tcagctgtactgaatgaatggaccacaactcccctggcattggcaggtttatgttcagca
tccgagttgccagaaccctcactgcctgacttttctgaaagcagaaggagaggatcctgg
gattcggtttctcagtcctctggatctgatattgttgatgtaattcattctagttccaca
actgcacacagcagtcacctctcaggaaaactaaaacttacatcgtctaatctaagtttg
gaaacaattggatcatcccaactatcatccagcctgaactctgatggtttgcttcagtca
aatggaatgaagagccctgatcaaaccacagaagagttgtggtcatgtgatacagacaag
ggtattgcaagtgcagaaagctccaacaaatctctacaagagatgccagatgaactcagc
agaggagaccaaacactagttttcacagagcacaactttgacatttctgtgatccagttg
gagttgccctcaaagcctccagaagagattgttttaactaatgctcagtcagatgaacac
gtggcaaacttgcatacatgtgacggggaggcgaacccaaggacaacagaaagccattca
caagttgaatcctcaccgccattctgtatccgtgcttcaactttgcagtgtccagtatct
gctgatgaaagtgataccaagaccacccctgcacttgctgatgaggtgctaaacactggt
catgctgaagaattgtcccatacgaacgttacaagaaattcacaatctatagtatgtcaa
gaccagcaagtaaaatatgaccaaaattacacggaagcagcagaacaggtttctgttgtg
ggagaaataacttgtggcacagatgaagtggacaaattgggcatgctcggcagtcagttg
actgaaccaggagataatcataaacgaagtagctggatatcagacgatgacatctgcaaa
ccatctccgagaagagtgctctcaaaaagcataagggaaagttcgtctgaatgttcagta
agctcaagacctgtgaatggaagtagcggccagctgaacacacacgctcagtcagtgtcc
aatttctctcagtgtaaacacagtcagggggattcatcttttaaagtgactcatcgccga
aaggcaggtatttcaaacccatttcgaggacttctgaaattgggtaacttagagaggcga
ggccatgttggcatttggaaggagtattactgtgagttatcaccatttgagttccgactg
taccaaaatgatgatgaccgcaattgctatgacaattgctctttattaagatgtgaatca
gtgggacctgcccatacagatgggaggtttgagttggttcttgctggcaaaagattgtgt
ctgcgcgcaccctcccaagatgaagctgaagactggattgaccggattcgggaagcttta
atgaagtgccggcctcatcaaactccaaaacaagaagcaaagtatacagacaattcagtg
agtgagatatcacacaacatgtctacaccatatactcctcaatctgttgaacagccaaac
tgtgagaaagaaaatggcttccagcaagtgtttaactggagttctcaggcagagcctcaa
ttggatgcaattaaagaatctgtactttatcagttaacagaaaaatcatggatgccatat
attttttctttgtcactggaagcattaaaatgtttccagttccaggaccagcagaaaatt
ctatgcgacagctatagaattgagacatttaaagacattatacctgatacagcacttggt
agcccggcttactttaaattaatcacttccaaaatcactctgaggcttcgagcggaaagt
gcagcagaggcaaaatcatggcgggaactaattcgtgcagttctttcatctttttgggaa
gcagaagaagatgccttggcagcaaatgtgaccattgagaagaatgagcgaagacttagg
gagcttggcttgggtgagcacatcaatctgttgcagtgtctaactgttgttcccgtggag
aaagggctggacgcacaagagtttcgatgtgcaggatgtcgtcaacaaattgggttttct
tttggaaaagccaagctttgtgctttttccagcctttactactgtgagatgtgtcatcag
gatacattaataattatcccttctagaatgatccataactgggacctggtgaaaaaaggg
gtttccaatgtggctgcaaaattcctgcaacaaattcaaaatgagccattcattgatatt
aatctgataaatgcaagtctgtaccagtatattgagcagatggcccaggcccgcaagagc
agaaagcgtttgaagctattggaagattatcttctcacatgtcggagtggtgcagtccag
gaattatacagaaaattggagcaaaagaagtatctcgtggagtcacctgatctgtacagt
gtttctgatcttcaacagacagcacatggagtgtttgaagcattcttgcagcatgccatc
caatatgccaccaatcatgtttatatgtgtgacctttgcactcagcgtggcttcatctgc
cagatctgtaatagcaatgacatcatctttccttttgagtttgaaacaacttcaaggtgt
aaagaatgcaagactgtcttccacaaggattgcaaggctggggtcttatcatgtccccgc
tgtgtgcgcaaacaaaaataccagcagagcaagatgaagtattaa
DBGET
integrated database retrieval system
