Rhincodon typus (whale shark): 109921182
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Entry
109921182 CDS
T06055
Name
(RefSeq) ellis-van Creveld syndrome protein-like isoform X2
KO
K19605
ellis van creveld syndrome protein 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109921182
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtp03037
]
109921182
Cilium and associated proteins [BR:
rtp03037
]
Primary cilia and associated proteins
EVC complex
109921182
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EVC_N
EVC_C
Motif
Other DBs
NCBI-GeneID:
109921182
NCBI-ProteinID:
XP_020376812
LinkDB
All DBs
Position
1:complement(161027145..161097798)
Genome browser
AA seq
901 aa
AA seq
DB search
MAASSSPALASCSARAGWTILSSQLQVYPAFLAIAVVLGFVLGIAGAVLLYIFVLEPALQ
RKEHCSSGTDDDSCSEYSDDSQSFKSNEDERGAKRGASPYYEENETSLNSNIAAFALKAR
VIYPINQKFRPLADGSSHPSLLEGLKQRDSIKRTKEDFVLSDSEFLDLKSERDYNCFPGN
YPPSTTVCNENNTVPIVTFFSELLGYTSPEAELGLYRFSLQTLRLLDAELRQEQYMMFLQ
LLKLQLNDLYLKEKIDETFYRDFLSTQEKELEKLQNLEQPVLLGDTNRKDCEQPYTLEEA
EQDEHSYLQYTIHQLSGFFKQTESAWSSFLNHSKLPKITVQELMRNISEKMLQVEILLTD
SLTFQITVILDRLMHWEFMTKSLQSLTWLVQQESKDKLMMVTSVLTVLNRDGTLAFWQKE
EILARIQHSVQDSVDTYINECAKQTKDLILEMKRRHRTLMKRLEETQRHETMNLKEQTTQ
MLTPTEFIQSCHELAERHRQTRCDVEDKENHNDVKAITKLWKNLHSTSSRILDKLMEELF
TETLPKLTSVSLPAMETLRSRLQQDLTARKKAAAEERKQHLKQFHEKLAQMKQVWMDEKV
INSVKQKYLIDKQEKIIQGFLLRQRDLEEMVSEHIILEHQVALQPMLRQLTLRHFSLLIL
KEMRLFKAKCLFSELGEQRMKEPPIWDQLEDENVKLQDNEMSKFSEEQRKLWKKADVIIH
QQLAAECQAFVDLLQHHMAWKIGRALTHQARVRSFKQNHDDNTQKLKNLLVERATESVYV
TMEGVTNLIQNYYQKIEEIMNVYQKDKKDQLSFMQETFKRQKLSMEAALEDNLKTDLVNV
KTNPLLPRRIQHQLVLQQKRTISMLLLEEETNMEFLKKRTVLLHQLKEQVDSRLKDDSCC
E
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagcagcagtcctgcactggccagctgttcagcccgagccggatggaccatc
ctttccagtcagttgcaggtttatcccgctttcctggcgatcgctgtggtgctgggcttt
gtcctgggaatcgctggtgcagtacttctttatatatttgtactggaaccagccttgcaa
aggaaggaacattgttcaagtgggactgatgatgattcctgttctgaatattccgatgat
agccagagttttaaaagcaatgaggacgaaagaggcgctaaacgtggagcttccccttat
tatgaagaaaatgaaacatcattgaacagtaatatagctgcttttgcactgaaggcaaga
gtcatatatcccattaatcaaaaattcaggccactagcagatggatcatctcatccctct
ctattagaaggattgaagcagagagattccatcaaaagaacaaaagaagattttgtttta
tcagattctgagttcctcgatctcaagagtgagagagattacaattgctttccagggaat
tatccaccatcaacaacagtctgtaacgaaaataacacagttccgatagtgacattcttt
tctgaattactgggatatacaagtcctgaagctgagcttggcctgtacagattcagtctg
caaaccctaaggcttttagatgcagaattacgacaagaacagtatatgatgtttcttcaa
ctactaaaattacaactgaatgatttgtacttgaaagagaaaatagatgagacgttttac
agagactttctatccacacaagaaaaggaactggaaaagctacagaacttggagcagccg
gtgttgctaggtgacaccaacaggaaagattgtgagcaaccttatactttggaggaagct
gaacaagatgaacacagttacttgcaatatactatacaccagctcagcggatttttcaag
caaactgaaagtgcctggtcctcctttttgaatcattccaaactccccaagatcactgta
caggagttaatgaggaacataagtgaaaaaatgttgcaggtggaaattctgctaactgac
tccttgacttttcaaatcacggttattctggataggctaatgcattgggagttcatgaca
aagagccttcaatccttgacatggcttgtgcagcaagaaagcaaggacaaattaatgatg
gtgacatcagtgttgactgttctcaacagggatggtacattggctttttggcaaaaagaa
gaaattttagccagaatacaacactctgttcaagacagtgtggacacatacatcaatgaa
tgtgcaaaacaaactaaagatctcattttggaaatgaagagaagacacagaactttgatg
aaacgacttgaagaaacacaaagacatgagacaatgaatctaaaagagcaaacgactcaa
atgcttactccaaccgagtttattcagagttgtcatgagcttgcagagagacacagacag
acccgctgtgatgtggaggacaaggagaatcataatgatgttaaggcaattactaaactg
tggaagaatctgcattctacgtcatcacggattctggacaaactgatggaggagctcttc
acagaaaccctaccaaaactaaccagcgtatcattacctgcgatggaaactctgagaagc
cgtctgcagcaagacctgacagcaagaaaaaaagcagctgcagaagaaagaaaacaacat
ttgaaacaatttcatgaaaaactggcccaaatgaaacaggtatggatggatgagaaagta
atcaactcggtgaaacaaaaatatctgatcgataagcaggagaagatcattcaaggattc
ctactgaggcagcgtgacctagaggagatggtttctgaacacattattctggagcaccag
gtagctttacaacccatgcttaggcagctaactctaaggcacttcagcctcttgatactc
aaagaaatgaggcttttcaaggcaaaatgcctgttcagtgaacttggggagcaacggatg
aaggaaccacccatttgggatcagcttgaggatgaaaacgtgaagctacaggataatgag
atgtccaaattctcagaagaacagaggaagctgtggaaaaaggctgacgtaattattcac
caacagcttgctgcagaatgtcaggcttttgtggatcttttacagcatcacatggcatgg
aagattggccgtgctcttacccatcaagccagagtgcggtcattcaagcaaaaccatgat
gacaacacgcagaaacttaagaatctattagtggagagagcaactgaaagtgtctatgtg
acaatggaaggtgtaaccaatctaatccagaactattaccagaagatcgaagaaatcatg
aatgtgtaccaaaaagacaaaaaggatcagctgagtttcatgcaagaaacatttaaaaga
caaaaactcagcatggaagcagctttggaggacaacctgaagaccgacttagtcaatgtg
aaaacaaatcctcttctaccaagaagaattcaacaccagttggtgctacagcagaaaagg
actatatccatgttgttgcttgaagaggagacaaatatggagttcctaaagaagaggaca
gtgctgcttcatcagctgaaggagcaggttgattcgcgcctaaaggatgactcctgctgc
gagtag
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