Rhincodon typus (whale shark): 109921268
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Entry
109921268 CDS
T06055
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04081
Hormone signaling
rtp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
109921268 (rapgef4a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
109921268 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109921268 (rapgef4a)
Membrane trafficking [BR:
rtp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
109921268 (rapgef4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
DEP
cNMP_binding
RasGEF_N
RA_2
RUNDC1
Motif
Other DBs
NCBI-GeneID:
109921268
NCBI-ProteinID:
XP_048455366
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All DBs
Position
7:complement(44478780..44591065)
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AA seq
811 aa
AA seq
DB search
MIRDRKYHLKTYKQCCVGTELVDWMIQQTPCVHSRPQAVGMWQVLLEEGVMNHVDQEHNF
QDKYLFYRFLDDEQEDVPAPTDEEKKVCEEELQETMLLLSQIGPDAHMRMILRKQPGQRT
VDDLEIIYEELLHIKALSQLSTTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIILKG
TVNVVIYGKGVVCTLQEGDDFGKLALVNDTPRAASIVLREDNCQFLRVDKEDFNRILCDV
EANTVRLKEHGRDVLVLEKIPMGSRPSNQGSIQTQYKYIVMAGTPEKILEHFLETIRPDL
PANGMTGVPPPWSLTERKGEVFLTDPCLDDFVLLHCIFMPHSQLYPALMAHYHAEALQGT
EQEKLDYALNNKRRVIRLVLHWAKVYADLLQEEDSAVAFLEEFYVSVSDDSRMIPALKEQ
LPELEKLVKQNSEDGNGKSSQKKHKVILRQFSIGEDRLQKRQPIRSMDEILFKVYCIDHT
YTTIRVRVAASVTEVISAVKDKLGSTEDLILVQMSSAGEKVVLKPNEVSVFTMPNVNGRL
FVCPREKFDCLTPLPEQEGPSTGTMATFELMSSKDLAYQITIYDWELFNCVYELELIYHT
FGRHHFKKTTANLDLFLRRFNEIQFWVVTEICLCSQLSKRVQLLKKFIKIAAHCKEYRNL
NSFFALVMGLSNVAVSRLSQTWEKLPSKFKKIYSEFESLMDPSRNHRAYRLTVAKLEPPI
IPFMPLLIKDMTFTHEGNNTLRDNLINFEKMHMIGNSVRTARHCRSQPFNLDSSLANKNH
QDVRVYVRQLNVIDNQRTLSQMSHRLEPRRS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgattagagaccggaaataccacctgaagacctacaaacagtgctgtgttggcacagaa
ttagtggactggatgatccaacagacaccttgtgttcattcccgcccacaggctgtaggc
atgtggcaggtgctgcttgaggaaggagtcatgaaccatgtggaccaagagcataatttc
caggacaagtacctgttctatcggttcctggatgatgaacaggaggatgtccctgcaccc
acagatgaggagaaaaaagtgtgtgaggaggagctacaggaaactatgcttctgctttct
cagattgggccagatgcacacatgagaatgattttacgcaaacagccaggacagagaaca
gtcgatgatttggaaatcatatatgaagaattattacacattaaagccttgtcacagctg
tctaccacagtaaagcgagagcttgctggtgttttgatatttgaatctcatgccaaagca
gggacagtgttgtttaatcaaggagaagagggcacttcatggtatattatcctcaagggc
acagtgaatgttgttatctatggcaagggagtagtctgtacgttacaagaaggggatgat
tttgggaagttggctttggtgaacgatactccaagagcagcttccatagtgcttcgtgag
gacaattgtcagtttctacgtgttgataaagaagattttaatcgaatcctttgcgatgtt
gaggccaatactgtgagactcaaagaacatggacgagatgtgttggttttggagaagata
ccaatgggtagcagaccttccaatcagggaagcatacagacacaatacaaatacatagtg
atggcaggaactcctgaaaagatattagagcactttctggaaactatacgccctgatttg
cctgctaatggaatgacaggtgtccctccaccatggtccctgactgagaggaagggtgag
gtttttttgacagatccatgccttgatgactttgttctgttgcactgcatttttatgcca
cacagccagctttacccagccctaatggctcattaccatgcagaagcattgcaaggtaca
gagcaggagaaattggactatgccctcaataacaagagaagggtcatccgccttgtccta
cactgggcaaaggtatatgcagatctcttacaagaggaagacagtgctgttgcatttctt
gaagagttctatgtgtctgtgtcagatgactcacggatgattcctgctttgaaggaacag
ctcccagaattagagaaactggtaaaacagaactcagaagatggaaatggaaagtcatca
cagaaaaagcacaaagttattttgcgtcagttcagcattggtgaggataggctccaaaag
agacaaccaataagaagtatggatgaaatactctttaaggtttactgcattgatcatact
tacaccacaatccgtgtgcgtgtggcagcttccgtaacagaggtcatcagtgctgtaaaa
gataagcttggatcaacagaagacctaattcttgtgcaaatgagctcagctggagaaaaa
gtggtgctgaagccaaatgaagtttcggtttttacaatgccaaatgtgaatgggcgcttg
tttgtctgtccaagggaaaaatttgattgtctgacaccactgccagaacaggaaggccca
tccaccggaactatggcaacttttgagttaatgagttctaaggatctagcctatcagatt
acgatttatgactgggagttgttcaactgtgtatatgagctggaattgatttatcacaca
tttggaagacatcatttcaagaaaaccactgccaacctagatctatttcttcgaagattc
aatgaaattcagttctgggttgtaacagaaatctgcctatgttctcagctcagtaaaaga
gtacaacttctgaagaagtttatcaagattgcagctcattgcaaagaatatagaaatttg
aattccttttttgctcttgtaatgggactgagcaatgtagctgttagccgtctctctcag
acctgggagaaacttcccagtaaattcaagaaaatctattcggaatttgaaagcttgatg
gatccttccaggaaccatagggcatacagacttactgtagctaaactggagccaccaatc
atccccttcatgcctttacttataaaagacatgacatttacacatgaaggcaacaataca
ctcagggacaacctcatcaattttgaaaaaatgcatatgattggcaactcagtaaggaca
gccagacactgcagaagtcaacccttcaatctagattcatcacttgcaaacaagaaccat
caggatgtccgtgtatatgttcgacagcttaatgtaattgacaatcagagaactttatca
cagatgtctcacaggttggagccacggcgatcctaa
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