KEGG   Rhincodon typus (whale shark): 109921792
Entry
109921792         CDS       T06055                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03420  Nucleotide excision repair
rtp04110  Cell cycle
rtp04114  Oocyte meiosis
rtp04120  Ubiquitin mediated proteolysis
rtp04141  Protein processing in endoplasmic reticulum
rtp04310  Wnt signaling pathway
rtp04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109921792 (rbx1)
   04120 Ubiquitin mediated proteolysis
    109921792 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    109921792 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    109921792 (rbx1)
   04350 TGF-beta signaling pathway
    109921792 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    109921792 (rbx1)
   04114 Oocyte meiosis
    109921792 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rtp04121]
    109921792 (rbx1)
   03400 DNA repair and recombination proteins [BR:rtp03400]
    109921792 (rbx1)
Enzymes [BR:rtp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     109921792 (rbx1)
Ubiquitin system [BR:rtp04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   109921792 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     109921792 (rbx1)
   Cul2 complex
     109921792 (rbx1)
   Cul3 complex
     109921792 (rbx1)
   Cul4 complex
     109921792 (rbx1)
   Cul7 complex
     109921792 (rbx1)
   Cul8 complex
     109921792 (rbx1)
   Cul9 complex
     109921792 (rbx1)
DNA repair and recombination proteins [BR:rtp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109921792 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109921792 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-RING_11 zf-C3HC4_2 DUF8003
Other DBs
NCBI-GeneID: 109921792
NCBI-ProteinID: XP_020377427
LinkDB
Position
37:4811038..4822756
AA seq 107 aa
MATAMDVDAPSSTNSGGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQA
SATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 324 nt   +upstreamnt  +downstreamnt
atggcgacggcaatggatgtggacgccccaagctctaccaatagtggcgggaagaagcgc
ttcgaggttaaaaagtggaatgcagtagccctgtgggcctgggacattgtggtggataac
tgtgccatctgccgaaatcacatcatggacctctgtatagaatgtcaagcaaaccaggct
tcggcgacttcagaggagtgcactgtcgcttggggtgtgtgtaatcatgccttccatttc
cactgcatttcacgttggctgaagaccagacaggtttgcccgttggacaacagggagtgg
gaattccagaagtatggccattaa

DBGET integrated database retrieval system