Rhincodon typus (whale shark): 109922623
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Entry
109922623 CDS
T06055
Symbol
xxylt1
Name
(RefSeq) xyloside xylosyltransferase 1 isoform X1
KO
K23800
xylosyl alpha-1,3-xylosyltransferase [EC:
2.4.2.62
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
109922623 (xxylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109922623 (xxylt1)
Enzymes [BR:
rtp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.62 xylosyl alpha-1,3-xylosyltransferase
109922623 (xxylt1)
Glycosyltransferases [BR:
rtp01003
]
Glycan extension
O-Glycan
109922623 (xxylt1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Csd3_N
Motif
Other DBs
NCBI-GeneID:
109922623
NCBI-ProteinID:
XP_048460645
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Position
13:32607799..32754631
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AA seq
391 aa
AA seq
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MGLCRKIVQSKASLRSYHFGLLFVAALAVFAFYYLGSNHENFSSTTRRMKENQAGKSSQG
DVQLTANLSGKKAAESQGSLPFANSEPEDTAGKRTVLFHALMMFTKVDKNYGLQEKFTVA
IKSMVKHAVFKDDEVLCLHFVADVPSKKIGEPLLQQLLQIASFKYQIIFHDVDTLTQKLF
PVVEGMQKHFSSGSGAYYSDSIFFLSVAMHRIMPPEMTRIVQLDLDLKYMSSIRSLFGEF
EKFQPGAVIGIAREMQPVYRHTFWQYRRENPKTKVGDPPPDGLPGFNSGVMLLNLEAMRQ
SERYNQLLNMENVRKLAEKYHFKGHLGDQDFFTLIGMEYIDLFHILDCTNNRQLCTWWRD
HGYAEVFDLYFKCDGQVKIYHGNCNTPIPDD
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgggattgtgcaggaagattgtccagagtaaggcctcactccgctcctaccactttggg
ttgctctttgtggctgctttggcagtgtttgctttttactacttgggatccaaccatgaa
aatttttccagcaccaccaggagaatgaaggaaaatcaggcaggaaagagttcacagggc
gacgttcagttgacagccaatctcagtgggaagaaagcggcagaatctcaaggaagtctc
ccgtttgctaacagcgagccggaggatacagcggggaaacggacggtactgtttcatgct
ctaatgatgtttaccaaggttgacaaaaactacggtctccaagagaaatttacagttgcc
atcaagtcgatggtaaaacacgcagtgtttaaggatgatgaggtactctgtctgcatttt
gttgctgatgtccccagcaagaaaataggagagccacttctacagcaactactgcaaatc
gcatcctttaaatatcagattatattccacgatgtggacaccttgactcagaagttgttt
cctgttgttgaaggaatgcagaaacattttagctctggatctggtgcctattatagtgat
tccattttcttcttgtcagtcgccatgcacagaatcatgcctccagaaatgactcgtatt
gtgcagttggacctggatttgaagtacatgtctagcatcaggagtctgtttggggagttt
gagaagttccagccaggagctgtgatagggatcgccagagaaatgcagcctgtttacagg
cacaccttctggcagtaccgcagagaaaatcccaaaactaaggttggtgatcctccaccg
gacggcctccctggattcaatagtggagtcatgctgctaaatttagaagctatgcggcag
tcagaacgctacaatcaacttctgaatatggagaatgtacggaaactcgcagaaaagtat
cattttaaaggtcacctaggtgaccaagatttctttaccttgatcggaatggagtacata
gacctcttccacattctggattgcacaaacaacagacagctctgtacttggtggcgggat
cacggttatgctgaggtctttgatctgtacttcaaatgtgatgggcaagtaaaaatttac
catggaaactgcaacaccccaatcccagatgactga
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