Rhincodon typus (whale shark): 109922940
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Entry
109922940 CDS
T06055
Name
(RefSeq) beta-1,4-galactosyltransferase 3-like
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00510
N-Glycan biosynthesis
rtp00513
Various types of N-glycan biosynthesis
rtp00514
Other types of O-glycan biosynthesis
rtp00515
Mannose type O-glycan biosynthesis
rtp00533
Glycosaminoglycan biosynthesis - keratan sulfate
rtp00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rtp01100
Metabolic pathways
Module
rtp_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
109922940
00513 Various types of N-glycan biosynthesis
109922940
00515 Mannose type O-glycan biosynthesis
109922940
00514 Other types of O-glycan biosynthesis
109922940
00533 Glycosaminoglycan biosynthesis - keratan sulfate
109922940
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
109922940
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109922940
Enzymes [BR:
rtp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
109922940
2.4.1.90 N-acetyllactosamine synthase
109922940
Glycosyltransferases [BR:
rtp01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
109922940
Glycolipid
109922940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
109922940
NCBI-ProteinID:
XP_020378555
LinkDB
All DBs
Position
6:59652068..59693877
Genome browser
AA seq
369 aa
AA seq
DB search
MSRRCSPNRPCTLLLLGFLQLAFVLFLYRRSLSGSFTSSLYEEDRGGHWDYSKTHDVYTN
LSLVTPSPDRQTLSRCPDESPLLVGPLTISFQKIPVMSKIARKNPYVQAGGRYSPPHCKA
QYKTAILVPHRNREPHLRHLLYYLHPFLQRQQLQYAIYVIHQTGNRTFNRAKLLNVGVRE
ALKDEDWDCLFLHDVDLIPENDHNLYVCNEKYPKHVSSAMNKFEYRLPYKMYFGGVSALT
PDQYLRINGFPNTYWGWGGEDDDISARIYLAGMKIIRTPLSLGHYKMISHSLDVGNEKNE
KRFDMIVKVARSWRLDGMNSVEYNLLHKEELPLYTNITVDFGNSAKIFLWKLGILWIQVV
MSSFKAGIG
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccgatgctccccgaaccggccctgcactctgctcctgctaggtttcctccag
ttggctttcgtcctgttcctgtaccgccggagcctctccggctccttcaccagctccttg
tatgaagaggatcgcggcggtcactgggattactccaaaactcacgatgtttacaccaac
ctcagcttggtgaccccgagcccagacaggcaaactttaagcaggtgtccggacgaatcg
ccgctgcttgttggaccactgactatcagctttcagaaaattccagttatgagcaaaatt
gcaagaaaaaatccatatgttcaagctggtggacggtactctcccccacactgcaaagct
caatataaaacagcaatccttgttcctcatcgcaacagggagccacatctgcgtcatctt
ctctattaccttcatccattcttgcagcgccaacagcttcagtatgcaatatatgtcatc
caccagactggaaatcgaacctttaacagagcaaagctgcttaatgtcggagtaagagaa
gcattaaaggatgaagactgggactgtctgtttctacatgatgttgatcttattccggag
aatgatcataatctgtatgtctgcaatgagaaataccccaagcatgtgtccagtgctatg
aataaatttgagtacagattaccatacaagatgtattttggtggtgtttcagctttgact
cctgatcagtacttgaggattaatggcttcccaaacacatactggggttggggtggagaa
gatgatgacatctcggctaggatttatttagcaggaatgaagataattcgaactcccctc
tcccttggacattacaaaatgatatctcacagcttggatgtgggtaacgagaaaaatgag
aaaagatttgacatgatagtaaaggtagcccggtcatggcgacttgatgggatgaattcc
gtagagtacaacttgcttcataaggaagagcttcctttgtacaccaacatcaccgtggac
tttggaaacagtgcaaaaattttcctgtggaaacttggaattctttggatacaggtagtc
atgtcttcgtttaaagctggaattggttag
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