Rhincodon typus (whale shark): 109924306
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Entry
109924306 CDS
T06055
Symbol
plxnd1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
109924306 (plxnd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
PSI_PlexinA-B
PSI_Plexin-B
RAMP
Motif
Other DBs
NCBI-GeneID:
109924306
NCBI-ProteinID:
XP_048462206
LinkDB
All DBs
Position
16:complement(61154677..61247951)
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AA seq
1879 aa
AA seq
DB search
MMGLVGISLGFLVGILPAVLAMKLEDTFRSTMPTNNLLVVGSSQQGQGLDPQPQVYVGAV
NAVYQLGPGLRLEARVKTGPVKDSALCHASQLPQNNCEHPRRWTDNYNKLLEADRAQGLL
VVCGSVHQGFCQLRALANISRLAVQFPPAAGTDLVFPSMLYVAANHPEASTVGLVLRGPG
TGSDPGSRLLVATTYTGLGTRYFPTNNSREDLRFENTPEIAIRALDTGRLSRLFTYDINP
SEDNVFKIKFEAKARNRLSFVRAFGHGAYTYLALNNDANSGSKGGRPRSLLARICTGARG
PRGTESRKLTESYIQLGLQCSSGLRLYSRLVSVWAGPAQSLYGLFERPEAGRGDTALCLF
GFPDIEQRIRGARRKCFEEDHSQEVTVLDSVIQGSGPACVRRNITLQNEQLDCGAAHLQH
PLSITKPLTAWPIYADRGLTSVAVSSVNNHTVVFLGTVSGQLLKLSLCSDQSIGKREVLH
VAPGEAVHHIMHFDPADQSYLYVMTTYQVSRVKVATCGQYQTCQECLAADDAHCGWCTLE
SRCSLQQDCVNSTEPLFWTSLSSGVQQCPSMNIVPSEIDAASVAQQNIGITIHGNVPQLI
GRDVYCVYGDEEKTPVTVYENNSSQSQLVHCPFLKKDKYSTFLVDKDHALLTVAIEVLNR
PIMWGNVTIYNCEKTGQVYPKTACRSCLQTKWACSWCVTEHRCVSDRAHCNGVSLNTLPQ
SFSQCPQALPTYIAPVPTGATRDIMVSLVNSQLLELSTSNRSHLFPVQLRLSGDHRFIDN
PSTISVEVYNCEVGRSDCSACWGRVDRGHQCVWCASTRSCKLQTECKPIEMTCPAPKLQQ
IEPLTGPVVGGTLLTIRGQNLGRRFSDIAKGVRIGEVACIPVQDSYIISEQIVCSTNGAN
QEFTDSVTVKVQKEGHSSQKFSFLLPEIDTLYPDQGPKAGGTTITINGINLHIGSVLKVL
VNGSKDCTSLKRTGRSIVCVMPPLPAAESAVPICVQFEKKHCIRKNLTFWYRENPLIESI
SPNTSYVSGGRRITVTGQRFYLAQTIHMVIEDSGKAQSVCAIESDSMLTCPSPPYSVSTV
NVHFDINGIRYKKASLTRASAAFRLHYYNDPHFYRKEKLIKHHKGEPLTLVIEKIQDNLN
LAPEEYKVMIGSFPCDLYVVKGKIHCSVNVSLESDERQLPVSVHVGKYNETIAMVQLSES
DFSIIMSIVVCVVLLLACAIALVVFCTKSRRAERYRQKTLLQMEEMEAQIREEIRKGFAE
LQTDMTDLTKELNRSQGIPFLEYKYFVIRTFFPKCSIDSESQSSERFHQLTSQSRIAAIS
PSPPETHPLLQPDWKVPENCRQNMEEGISLFSLLLNNKHFLITFVHALEQQKDFAVRDRC
NLASLLTIALHGKLEYYTSIMKELLVDLIDASASKNPKLMLRRTESVVEKMLTNWMSICM
YSFLKDTVGEPFFLLLCAMKQQINKGSVDAITGKARYTLNEEWLLRENIEARPMNLNVSF
QGCGMDSITVRVMDSDSISQVKEKILEGFYKNVPFSQWPRVEDVDLEWFASSSDSRILRD
LDNTSVMEDSRKKLNTLAHCKVPDGASLAMSLKDKWDGTLGRVKDLDTEKYFHLVLPNDE
LVETKKSHKHSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFRAVLSIHAVKPPFAVKYFFD
FLEEQAEKRGITDPDTLHIWKTNSLPLRFWVNILKNPQFVFDVEKTDHMDACLSVIAQAF
IDACSISDLQLGKDSPTNKLLYAKEIPEYKKAVQRYYREIQEMITLSEQEMNAHLAEESR
KYQNEFNNNFAMAEIYKYAKRYRCQVGLMYLSVPAVSVLQKLVAVNVTGHVTNQSPVHSL
LSLPTSPAVTPSLTCRQGM
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcctagttgggatcagtctcgggttccttgttgggatcctccctgctgtgctg
gccatgaagctggaggatacctttcggagcaccatgcccaccaacaacctgctagtggtg
gggagctcacagcaaggccagggcctggacccccagccccaggtgtacgtgggggctgtc
aatgcagtgtaccagctgggtccgggcctgaggctggaggcccgggtgaagacggggcct
gtgaaggacagtgctttgtgccatgcctcacagctgccccagaataactgcgagcacccc
cgcagatggacagacaactacaacaagctgctggaggctgaccgtgcccagggtctgctg
gtggtctgtggatccgttcaccagggcttctgccagctccgggccctggctaacatcagt
cgcttagcagtgcagttcccaccggcagctggcacggacctggtcttccccagcatgctg
tacgtggctgccaaccaccctgaggcctccaccgtgggattggtgctccgaggcccaggg
acggggtcagaccctgggagtcgattactggtggccaccacctacacgggcctgggcacc
cgctacttcccgaccaacaacagccgcgaggacctgcggtttgagaacacacctgagatc
gccatccgtgccctggacacgggccgtctctcgcgcctcttcacctacgacatcaacccg
tccgaggacaatgtctttaagatcaagttcgaggccaaggccaggaaccggctgagtttc
gtcagggccttcggccacggggcctacacctatctcgccctcaacaacgacgccaactcg
ggcagcaagggcgggcgcccccgtagcctgctggcccgcatctgcaccggggcccggggc
ccaagagggaccgagagccgcaaactgaccgagtcgtacatccagctgggcctgcagtgc
agctcgggcctcaggctttacagccgcctggtatcggtgtgggccgggcctgcccagagc
ctgtatggcctgttcgagaggcccgaagccgggaggggggacacggccctctgcctgttt
ggcttcccggacatcgagcagcgaatccgcggggccaggagaaagtgcttcgaggaggat
cacagccaggaggtgacggtgctggacagtgtgatccaggggagcggaccagcctgcgtt
cgccgcaacatcacgctgcagaatgaacagttggactgtggagctgctcacctccagcat
ccgttgtccataacgaagcctctgacagcctggcccatctacgcagacaggggccttacc
tcggtggcagtgtccagtgtgaataaccacactgtggtgttcctgggcacggtcagtggg
cagcttctgaagctcagtctgtgcagtgaccagtcaatcgggaagagggaagtgctgcat
gtggcaccaggcgaggctgtgcatcacatcatgcactttgaccctgcagatcagagctac
ctctacgtcatgactacataccaggttagtcgggtgaaggttgccacatgtggccagtac
cagacctgccaggagtgcctcgcagcagacgatgcccactgtggatggtgtaccctggag
agcaggtgttccctgcagcaggactgtgtcaattccaccgagccgttgttctggaccagc
ctgagctccggagtacagcagtgccccagcatgaatatcgtaccatcggagatcgacgca
gcgagtgtggcccagcagaacattggaatcaccatccatgggaatgtgccccagctgatt
ggaagagacgtctattgtgtttatggggatgaggagaagaccccagtcactgtctatgaa
aataactccagtcaatcccagttagttcattgccctttcctaaagaaggataaatactcc
acattcctggtggacaaagatcatgctctgttgacggtcgcgattgaggtgttgaatcga
ccgatcatgtggggaaatgtaaccatctacaattgtgagaaaacaggacaggtttacccc
aaaacagcgtgcagaagctgtctccagaccaaatgggcctgttcctggtgtgtgactgag
caccggtgtgtgtcagacagagcgcactgtaatggggtttcactgaatacactaccccag
agcttcagccagtgcccacaggccctaccaacatacattgcccccgtgccaacaggggct
acacgggacattatggtctccctggtcaacagtcagttgctcgagctgtccacgtcgaac
aggagccacttgtttccggtgcagctgaggctgagtggggaccataggtttatcgacaat
ccaagcaccatctcagtggaggtttataactgtgaggttgggagatctgactgttctgct
tgttggggccgagttgaccgtggtcaccagtgtgtctggtgtgcgagcacaagaagctgt
aaactacagactgagtgtaaaccgatcgagatgacctgccctgctcctaagcttcagcag
atagagccactgactggtcctgtggttggagggaccctcctcacaatacgaggccagaac
ctgggccgtaggttcagcgacattgccaagggcgtgcgcattggtgaagtggcatgtatc
cctgttcaggacagctacatcatctctgagcagattgtgtgcagcacgaatggagctaat
caagagtttacagattccgtgacagtgaaggtccagaaggaaggtcactccagccagaaa
ttctctttcctgcttccagagattgacacactttatccagatcaaggacccaaagctggg
ggcaccacgattaccatcaacggcattaacttacacatcggttctgtcctgaaggtcctt
gtcaatggctcaaaggattgtacaagtttaaaacggacagggaggtcgattgtctgtgtg
atgccaccattgcccgctgctgagtctgctgttccgatatgcgtgcagtttgagaagaag
cattgcatcaggaagaacctgaccttctggtacagggaaaacccattgattgaaagcatt
agccccaacaccagctatgtcagtggcggaaggcgaattacagtcactggacagaggttc
tacttagctcaaaccatccacatggtgattgaagacagtgggaaagcacagtcagtctgt
gccattgagagtgactccatgctaacctgtccgtcacctccatactcagtttccacggtg
aatgttcactttgacattaatgggattcgctataaaaaagcaagtctgacgcgtgccagt
gcagcctttagactgcactattacaatgacccccatttctaccgcaaagagaaactgatt
aaacaccataagggagagccactcaccctggtgattgagaaaatacaggacaacttgaac
ctggcaccagaagagtataaagtgatgattggctccttcccctgtgatctctatgttgtg
aagggaaagattcactgttcggtgaatgtctctctggagtccgacgagagacagttacca
gtgtcggtacatgtggggaaatacaatgagaccattgcgatggtacagttgagtgagagc
gacttttccatcatcatgtccattgtggtgtgtgttgtgttgctgctggcctgtgccatt
gctctggtcgttttttgcacaaagagcagacgtgcggagcgatatcggcagaagactctg
ctccagatggaggagatggaggctcagatcagggaggagatccggaaaggttttgccgag
ttacagaccgacatgacggatctgacgaaggaattaaaccgtagccagggaatcccgttt
ctggagtacaaatactttgtcatccgtacattcttcccaaagtgctccatagacagtgaa
agccagagctcagagcgtttccaccagctgacctctcagtcccgcatagcagccatttct
ccgagccctccagagacccacccactgctacagcctgattggaaggttcctgaaaactgt
cgtcagaacatggaggaagggatcagcctgttctcgctgctcctcaacaacaaacatttc
ctcatcacctttgtccacgctctcgaacagcagaaggattttgcagtacgggacaggtgt
aatctggcttctttactgaccatcgcactgcacgggaagctggaatactacaccagcatc
atgaaggagctgctggttgacctcatcgatgcgtcagcctccaagaaccccaagctgatg
ctacggcgaacggagtcggtggtggagaagatgctcaccaactggatgtccatctgtatg
tacagcttcctcaaggacactgtgggagagcctttcttcttattactgtgtgccatgaag
cagcaaataaacaaaggctcagtggatgccattacaggaaaagctcgatacaccctgaat
gaagagtggctcctcagggagaatattgaagcgagaccaatgaatctcaatgtgtcattc
caaggctgtggaatggactccatcacagtccgtgtcatggacagtgactccatcagccaa
gtcaaggagaagattctagaaggattttacaaaaatgtgcctttctctcagtggcccaga
gtagaagatgtggatctggagtggtttgcatcaagtagtgacagcaggatcctgcgggac
ctggacaacacgtctgtgatggaggacagccgaaagaagctcaacaccctggctcattgc
aaggtccctgatggagcatcattggccatgagcttgaaggacaagtgggatggtacactc
ggacgagtgaaggacttggacactgaaaaatacttccatttggtcctaccaaatgatgaa
cttgttgaaacaaagaaatctcacaagcacagtcaccgcaagaaagttttaccagagatc
tacctgaccaggctgctctccaccaagggcacgctgcagaagttcctggatgatttgttc
cgagctgtgctcagtatccatgcagtgaaacctccattcgcagtgaaatatttctttgat
tttctggaggagcaggctgagaaacgaggcatcactgacccggacaccctgcacatctgg
aaaaccaacagcttgccgctgcgtttttgggtgaatatcctgaagaacccgcagtttgtt
ttcgacgtggagaagactgaccatatggacgcctgcctgtctgtcatagcccaggcattc
attgacgcctgctccatttctgacctgcagctgggcaaggattcaccaacaaataaactc
ttatatgcaaaagaaatcccagagtacaagaaagctgtgcagagatattacagagagatc
caggaaatgatcacactgagtgaacaggaaatgaatgctcacctggcagaggagtcccgg
aaataccaaaatgagttcaacaataattttgccatggctgaaatctacaaatatgctaag
agatatcgctgccaggtgggtctaatgtatctgtcagttcctgctgtttctgttttgcag
aagttggtggctgtaaacgtgacaggtcacgtaactaatcagagcccagtacatagcctt
ctgtccctacctacaagccctgccgtcactccttccctaacatgtagacaaggcatgtag
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