Rhincodon typus (whale shark): 109924650
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Entry
109924650 CDS
T06055
Name
(RefSeq) CD40 ligand-like
KO
K03161
tumor necrosis factor ligand superfamily member 5
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04060
Cytokine-cytokine receptor interaction
rtp04514
Cell adhesion molecules
rtp04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109924650
04514 Cell adhesion molecules
109924650
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
109924650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109924650
04090 CD molecules [BR:
rtp04090
]
109924650
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Tumor necrosis fators
109924650
CD molecules [BR:
rtp04090
]
Proteins
109924650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Tom5
C1q
TRH
Motif
Other DBs
NCBI-GeneID:
109924650
NCBI-ProteinID:
XP_048461167
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All DBs
Position
14:1118042..1130270
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AA seq
311 aa
AA seq
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MLRRGHSSLREGTVFTVSAAVENMNEASSKSPEEQRAGQQQASLAVRAFIYLLAAFLLAH
MVSSALLYVYFSIKLQKVQDIMSTEPEYMFLQILKKCESKDQIEKNKHFCEGGRSRFQHF
LKYLVNNTEEQQHHEDPRQEMQIGNHPAPTMGSIIKLQSSAAHLIATNHPHNRPETNFPN
DKGKPIKQWMAEGFPAFTHNINYTSGKLVITEPGFYYVYCQVSFRLSSNTTLNSSNAPFL
QYIYLQRMKEQTTLLMKASKTPVDKKQAASFNSINQGGVFQLKTGDKLFVTVTDPELLSY
DSATYFGIFQL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcagaggtcactccagtctgagagagggcactgttttcactgtctctgcagcc
gttgagaacatgaacgaagcatcaagcaagtctccggaggagcagagagctggccagcag
caagcctctttagcagtgcgagccttcatctaccttctggctgctttcctgctcgctcat
atggtctcaagcgctttactgtatgtctacttctcaatcaaactgcagaaggttcaggac
ataatgagcacggaaccagagtatatgttcctgcagattctaaaaaagtgtgaaagtaag
gatcagatcgagaagaacaaacatttctgtgaaggaggaagatcacggttccagcacttc
ttaaagtacctagtgaacaacactgaagaacaacaacaccatgaagatccaagacaagaa
atgcagatagggaatcaccctgctccaacaatgggcagcatcatcaaacttcaaagttct
gcagctcacctcatcgccaccaaccacccccacaacagaccagagaccaactttcccaat
gacaaaggcaagccaataaagcaatggatggctgaaggtttcccagcttttacacacaat
ataaactataccagtggtaagcttgttatcactgagcctggattttactacgtttactgt
caggttagttttcgactgtccagcaacacgactctcaactcatccaacgccccatttctt
cagtacatctatttgcaaagaatgaaggagcaaaccacgctactcatgaaggcatcgaaa
acaccagtcgataaaaagcaagctgctagtttcaactcaatcaatcaagggggtgtgttt
cagctgaaaacaggagataaactgtttgtgactgtgacagatccagagttgctcagttat
gacagtgccacttactttggtatctttcagctttaa
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