Rhincodon typus (whale shark): 109927471
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Entry
109927471 CDS
T06055
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109927471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109927471
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
109927471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
FOXP-CC
zf-C2H2
Zap1_zf1
zf-C2H2_4
zf-H2C2_2
zf-C2H2_aberr
zf_C2H2_ZNF292
Motif
Other DBs
NCBI-GeneID:
109927471
NCBI-ProteinID:
XP_048455212
LinkDB
All DBs
Position
7:complement(82105969..82478031)
Genome browser
AA seq
1612 aa
AA seq
DB search
MAAQAQTTATEKKEAKSSIIEGDVFTEASKKSAASAASREVESPWPDYVRERRNAISMRP
HGTGLSYCKITEEPCSSSEDSSSSSKTKNSLGSLPDLAEQHTPYRAVCLSVDPRNGYMDQ
RYSSHHIFPAFHTPIPIDMRHHEGRYHYEPHSIHTIHGPPALTGSPVFSDISLIRLSPHR
NPAATGESPFSPPHPYVNPHMEHYLRTMHGSPTLSMISAARGLSPADVPHEHLKDRGLFS
LPPPPPGANPAEYYHQMTLMATHRSPYGDILMQTGGTGSTTHITDYINPVDISRFSSPRP
AARMSRKRALSISPLSDASIDLQTMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGAISP
AFSFPHPINPVTFQMHQQILNQQRGLNSAFGHTPPLIQPSPTFPPRQHMSSTSAVLPPSQ
ANNASTETSQSKLSGESAVSSTVDPMINKRTKVKTEVEGPRAISPSTEDRLAGLTEVKDD
LDKDDCKQEPEVIYETVCHWEGCNKEYDTQEQLVHHINNEHIHGEKKEFVCRWRDCSREQ
KPFKAQYMLVVHMRRHTGEKPHKCTLSSQKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPD
AHVTKKQRNDTHPRPPPPKEPSDHDVAIGPGNRGAEEKVEANSTSGSLDDCLQVKTIKTE
NSMMYQSSPGGQSSCSSEPSPLGSTNNNDSGVEMNINSGGSLGDLTALDDSPIVDSTVSS
GTSAISLHLRKNMTAPQRLEQLKKEKLKQVRDIPSWANPVPPVKNTKLPLIPMNGVSLEN
STTGGSTAVLPNPRITELSNSEITVLNQLNERRDSATSTISSAYTVSRRSSGISPYLSSR
RSSEASHIGGRPNNISSADSYDPISTDLSRRSSEVSYCGGLLNLTPAEQYRLKAKYAAAT
GGPPPTPLPNMERLSQKARMSLLGDGPNSVYAPFPPPASQRRCSDGVPRGYGTAALRPHE
LIGNTTRRASDPVRRTAVDPLSLPRVQRFNSMNNMNPLPLPPAMDRHHYGLQNPTRSDGS
LHRCAYSPRPPSISENVVMETVAGEIDVQAVEDDIMLPDDVVQYINSQENRLAQDNNPLN
FTGQMQGFQENLSVQNQNPYGHRGMAMVDGNMNQPSSMMTQCQISPGSQPYQGSPNMNKN
SMPVQWNEVSSGTVDVIPDQSKQQFSRSNLAVVQQKQMFDQYQNLNSAQPTVPMNQNEMA
LAQQGVMQRGIGVNGQRMNYMQQQQQQPQAMSLCQNANQPLSSHQTFNQSSQMLSPNIAS
RTLSQTACSNMPASNMMGSPVPAGTQDFKQMAMMQSKDAAIKSYAQAQQVRAQIHQQMAG
TNEVPMMMNGCRSRDAPAQGMHVASQQNFGPHVQSGRNPGHSSFPAHGVLSQTNSQVSPN
QQNFSQAGSNIMSSAEHDLSRGMMQPHPPQGSNPLARQHGLMNSLNMQQQSYLQSPLQMN
GMSPGHGQSEVSHNQPGNQLSMQSQQCNNDGSNSNLMFYSGQIHMYEQNGNFSGQMDCAI
QQQQRMQGVKAAAMASPGTNQVSSTVNSHSLDHAQIDFDAIMDDGDHSSLMSGTLSPSLL
QNLSQNSSRLTTPRNSLTLQPIPAGLTNMAIGDMSSMLTTLAEENKFLNMMS
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccaagcacagaccactgccactgaaaagaaagaggccaaaagctccattatt
gaaggggatgtcttcacagaagctagcaagaagtcagcagcctcagcagcatcacgagaa
gtcgaaagcccctggcctgactatgtaagagagcgcaggaatgcaatctcaatgcggcca
cacgggacagggctgtcctattgcaagataactgaagagccgtgcagctccagtgaagac
tctagctcttcctcaaaaaccaagaactctctgggctcactgccagacttagccgagcag
catactccctaccgggcagtctgtttgtcagtggacccccgaaatggctacatggaccaa
cgctattcatcgcaccacattttcccagccttccatacgcccataccaatcgatatgcgg
catcatgaaggaagataccattatgagcctcactccatccacactattcacgggcctcct
gccttgactggaagccctgtcttctctgacatctccctcattaggctgtctcctcatcgg
aatccagcagccacgggcgagtctcctttcagtccaccccatccttatgtcaatccccac
atggagcattacctgaggaccatgcatggcagccccacactctccatgatctctgcagca
agaggcttaagtccagctgatgttcctcatgagcacttgaaggacagaggtctgtttagc
ctgcctcctcccccaccaggagctaatccagctgaatactatcatcaaatgactctaatg
gccactcatcgaagcccgtatggtgacatcctgatgcagaccggtggaacaggcagtacg
acgcacatcacagattacatcaaccccgtggacatctcgagattctcgagtcctcggcca
gctgcgagaatgagcagaaagcgggccctgtctatctcgccgctgtctgacgccagcatc
gacctgcagactatgatcaggacatcccccaactctctggtggcctacatcaacaactcc
cgaagcagctcagcagccagtggctcatacgggcatctatcagctggtgctatcagccca
gcgttcagttttcctcaccccatcaacccggtgacattccagatgcaccaacagatactg
aaccagcaacgcggcctgaactctgcatttggccacactccaccccttatacagccatca
ccaacgttccctcctcggcagcacatgtccagtacctccgctgttttgccacccagccag
gccaataatgcctcaactgaaacttctcagagcaagctgagtggtgagtctgctgtgagc
agtactgttgacccgatgatcaacaaacgcaccaaagttaaaactgaggtagagggaccc
cgggctatctctccaagtactgaggatcggctggcagggctgacagaggtgaaggacgac
ttggataaagatgattgcaaacaggagccagaggtcatttacgagaccgtgtgtcactgg
gaagggtgcaacaaagagtacgacactcaggagcaactggtgcatcacattaacaatgag
cacatccatggagagaagaaagagtttgtttgccggtggcgagattgttctcgggaacag
aagccattcaaggcgcagtacatgcttgtggtgcacatgcggcgacacacaggggagaaa
ccacacaagtgcactctctcttcacagaaaccgtacgtttgcaaaattcctggttgcacc
aaaaggtatacagaccccagctcccttcggaaacacgtgaagactgtccatgggccagat
gcccatgtgacaaaaaagcaacgcaatgacactcatcccagacccccaccccccaaggaa
cccagtgaccatgatgtcgccatcgggcctgggaatagaggggctgaggaaaaagtcgaa
gcaaacagcaccagtgggagcctggatgactgcctgcaagtaaaaaccatcaaaacagaa
aattccatgatgtatcagtccagccctggtggccaatcttcatgcagcagtgaaccatcg
ccacttggcagcaccaacaacaatgacagtggagtagaaatgaacatcaacagtggaggt
agcctgggagatttgactgccttagatgattccccaattgtggactccactgtttcatct
ggaacttcagcaatcagccttcatttgagaaagaacatgacagcaccccaaagacttgag
caactaaagaaagaaaaattgaagcaggttagagacattccttcatgggcaaacccggtg
ccaccagttaagaacaccaagctgcctctcattcccatgaatggagtttcactggagaat
tcaactactggtggttccactgccgtgttgcctaaccctagaataacggaactgtccaac
agtgagatcactgttttgaatcaactgaatgagcgccgtgacagtgccacgagcaccatc
agttcggcctacactgtcagtcgaaggtcatctggcatttccccttacttgtccagccgc
cgctccagcgaggcttcccacattggtggccgtccaaataacatcagctcggccgactcc
tatgaccccatttccacggatctgtcacggaggtccagcgaggtcagctactgtggtggc
ctgctcaatctgacgccggctgagcagtacaggctgaaggctaagtacgctgccgcgact
gggggcccacctccaacgcctctgccgaacatggagcgcttaagccagaaggcgagaatg
tcgctcctgggggacggccccaattctgtgtatgctccgttccctcctcctgcctctcag
aggcgatgcagcgacggcgttccacgaggctatggcacagcagctctccgccctcatgaa
ctcattggcaataccaccaggcgggcgagtgatccggtcagaaggacagctgtggatccc
ctgtctcttcccagggtccagcgcttcaacagcatgaacaacatgaacccactgccgttg
ccgccagcaatggacaggcatcactacggcctccaaaaccccactcggtcggatggaagc
ctccacaggtgtgcctactcgcctaggccacccagcatcagcgagaatgttgtcatggag
actgtggccggcgagattgacgtccaagccgtggaggatgatataatgctgcccgatgac
gtggtgcagtatatcaactctcaggaaaatcgattggcccaggataacaatccattgaat
ttcactgggcaaatgcagggtttccaagaaaacttgagtgtgcagaatcaaaacccgtac
ggccaccgtggaatggcaatggtcgatggtaacatgaatcagccaagttctatgatgaca
cagtgccagatcagtccagggagtcaaccataccagggatcgcccaacatgaacaagaac
agcatgccagttcagtggaatgaagtaagctcaggtacagtcgatgtcattcctgatcag
tcgaagcagcagttctctcggtcaaacctggcagtagttcagcagaagcaaatgtttgac
cagtaccagaacctcaactccgctcagcccactgtgccaatgaatcagaatgagatggct
ctcgcgcagcagggtgtaatgcaaagaggtatcggtgtgaacgggcaaaggatgaattat
atgcaacaacaacagcagcaaccacaggcaatgagcttgtgccagaacgctaaccaacct
ctcagctcgcaccagacttttaatcagtccagccaaatgcttagccccaatattgccagc
aggactctcagccaaacagcttgcagtaatatgccagcaagcaacatgatgggctcacct
gtgccagcaggtactcaagactttaagcagatggcaatgatgcagagcaaagatgcagca
atcaaaagctacgctcaagctcagcaagtccgggcgcagattcatcagcaaatggctggc
acaaacgaggtgccaatgatgatgaacgggtgccgttccagagacgcaccagcgcaaggc
atgcatgttgcaagccaacagaactttgggcctcatgtccaatctggcagaaatccaggc
cacagctccttccctgcccatggagttttaagtcaaactaattcccaagtcagcccaaac
cagcagaacttcagccaagcagggtcaaatatcatgagttctgctgagcatgacttaagt
cgtggaatgatgcagccccatccaccccagggttcgaatccattagcaagacaacatggt
ttaatgaattctttaaacatgcaacagcaaagttatctgcaaagcccactccagatgaac
ggcatgagccctgggcacggtcaatccgaagtaagccacaatcagcctggtaatcaactc
tcgatgcaatcgcaacagtgtaataacgatggttcaaacagcaacttgatgttttattct
ggtcagatccacatgtatgaacaaaatggcaacttcagtggccaaatggactgtgctatt
cagcaacaacagcgtatgcaaggtgtcaaagctgcagcaatggcctcaccaggcaccaac
caggtatcaagtacagtaaactcccacagtctagaccatgcacaaatagattttgatgct
atcatggatgatggtgaccattctagcttgatgtcaggcacattgagccccagccttctg
cagaacctctctcaaaattcctcacgtctcacaactcctcggaattctctgactctgcag
cccattccagccgggttgactaatatggcaataggagacatgagctccatgttaactacc
ttggctgaggaaaataaatttcttaatatgatgtcttaa
DBGET
integrated database retrieval system