Rhincodon typus (whale shark): 109928617
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Entry
109928617 CDS
T06055
Name
(RefSeq) toll-like receptor 2
KO
K10159
toll-like receptor 2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04145
Phagosome
rtp04620
Toll-like receptor signaling pathway
rtp05132
Salmonella infection
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109928617
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109928617
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109928617
09171 Infectious disease: bacterial
05132 Salmonella infection
109928617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109928617
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109928617
04054 Pattern recognition receptors [BR:
rtp04054
]
109928617
04090 CD molecules [BR:
rtp04090
]
109928617
00536 Glycosaminoglycan binding proteins [BR:
rtp00536
]
109928617
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Phagocytosis
Toll-like receptors
109928617
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of breast milk
109928617
Pattern recognition receptors [BR:
rtp04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
109928617
CD molecules [BR:
rtp04090
]
Proteins
109928617
Glycosaminoglycan binding proteins [BR:
rtp00536
]
Hyaluronan
Cell surface receptors
109928617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_9
LRR_14
LRR_5
LRR_LRWD1
LRRCT
Motif
Other DBs
NCBI-GeneID:
109928617
NCBI-ProteinID:
XP_048458362
LinkDB
All DBs
Position
10:25419572..25427159
Genome browser
AA seq
809 aa
AA seq
DB search
MTPLRAIAILTCALFMPIYTMPKMIDTVLVNCSGIGYPHSPCFLTPDVEVLDLSYNNITM
IQQQNFQNLNKLRKLFLQFNHITAIEPGSFAKNSELRYLDLSNNLLQDISVLPFNHLQSL
THLDITNNMFDTADFGAEINKLQKLHSLRFGNTRLSSLNSGSLSVLQGIPLKDVYLITGD
LQAFEPGTFNALQNVEKLSLDLQFGQDGKLLINIFQDIPMSTTTLEILNSDFVKKASNVD
FFFPLKKLNISTLVAHNITIDDSLTTYLLNSVLGSNIKELVLDTIIMDGIGNWDVIPIPS
DQINLRKLQILNVENPNFYHFYSLEYLIDIFAQLTELMILKGNLFYVPCQISEIMTYLRH
LDISFNLLQEFSFIPGKCSAPFPNLNTLIANNNKFSNLPKFSTLLSKMEKLSSINASHND
LVLQKGLTCTWPQTLKCINFSHNNLEGNVFGCLPASLQSLDLSYNSITAVPNLKGLRNLR
EIFLTENFIASFPEIPVGYSLKVLHIDQNKITDINIRFLQSLDLAELKFSNNPLECFCAI
QSVSNYVQQRRVVILDWPDRYRCESPRKFKGQIIQALKFSPIECKIPLFVGVLLACVALL
VGVCIVLCIKFNITWYCRTLWLWLKAKKSLDANLVEKNFEYNAFVSYSEYDSAWVKNKLL
IQLENNEPPYRICIHERDFKPGKPIINNIIDCISKSYKTIFILSKHFVQSEWCHYEFFFA
HQQIFDDKKDSLILLLLEPIPKNSIPDRFCKLRKLMNRNTYLEWPQNEFQQGFFWKRLKA
VLNLDFHSCSSRVTLQGVIQEPDEIPDRV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgacacccctacgagcaattgctatattgacatgtgctctatttatgcctatttacaca
atgccaaagatgatagatactgttttagtgaattgttcaggaattggttatccacattct
ccttgtttcctgacaccagatgtagaggtattggatctgtcttataacaacatcacaatg
attcaacagcaaaatttccaaaatcttaacaagctgaggaaactttttcttcagttcaat
cacatcactgcgatagaacctggatcatttgcaaaaaattcagaactaaggtatcttgat
ctttcaaataatcttttgcaggatatttcagtcttgccatttaaccatctccagtcactg
acacaccttgatatcactaacaatatgtttgatacagctgactttggagcagagatcaac
aaactacagaaactgcattctttacgttttggaaacactcgtctttcttctttaaactct
ggttccttatctgtacttcaaggaatcccacttaaggatgtttatttaattactggagac
ctacaggcatttgaacctggaacatttaatgccttgcagaatgtagaaaaactctctctt
gatttgcagtttggccaggacggaaaattactcatcaatatttttcaggatattccaatg
agtaccactacattggaaattctaaattctgactttgttaaaaaagcaagtaatgtagat
ttcttcttccctctgaaaaagttgaatatctcgacactagttgcacataatattaccatc
gacgattctttgaccacttatttactcaacagtgttcttggttcaaatataaaagaatta
gttttagacacaattataatggatggcattggcaattgggacgtaatacccataccatct
gaccagattaatttgcgcaagcttcaaatacttaatgtagaaaatccaaatttctaccat
ttttactcacttgagtatcttattgatatatttgcacaactgacagagttaatgatacta
aagggaaacttgttttatgttccatgtcagatatcagaaattatgacgtacttaagacac
ttggacatatcttttaacttgcttcaagaattcagctttattcctggaaaatgctctgct
ccttttcccaatcttaatactctcatagcaaacaacaataagttttcaaatctaccaaaa
tttagcacattattatctaaaatggagaagttgtctagtataaatgctagtcataatgat
cttgtactacagaagggattgacctgcacgtggcctcagactctaaagtgtataaatttt
tcacacaataacctggaaggcaatgtgtttggctgcttgccagcatcattgcaatcacta
gatttgagttacaattccatcactgcagttccaaacctcaaagggctcagaaatctccgt
gagatttttttgacagaaaatttcatagcatcttttcctgaaattccagtgggttactcg
ctgaaagtcttgcacattgaccaaaataaaattacagacataaacatacgctttctacag
tccttagatctagctgaactcaaattcagcaataatcctctggaatgcttctgtgcaatt
cagtcagtctctaattatgttcaacaaagacgtgtagtgattcttgattggccagaccgg
tatcgatgtgaaagtccaagaaaatttaagggtcaaattatccaagccctgaaattttcc
ccaattgaatgcaaaattcctttatttgttggggttcttttagcgtgtgttgcacttttg
gtaggtgtctgtattgtgctgtgtataaagtttaacatcacttggtattgccgcacactc
tggctctggcttaaagctaaaaaaagtctagatgccaatctggttgaaaaaaattttgag
tacaatgcttttgtttcgtatagtgaatatgattcggcatgggtgaagaacaaattgctc
atacagttagaaaataatgagccaccttaccgcatctgtatccacgaaagagacttcaaa
cctggaaaaccaataattaataatataattgattgtatatcaaaaagttataaaaccata
tttatcctatccaaacacttcgtgcaaagtgaatggtgccattatgaattcttctttgca
caccaacagatatttgatgacaaaaaggacagtcttatcttgctcctgttagaacctatt
ccaaagaattccatcccagatcgattttgtaaacttaggaaattgatgaacagaaacact
tatttggaatggcctcagaatgagtttcagcagggcttcttttggaaaaggttgaaagct
gtcctgaatttggatttccattcatgcagttcaagagtaactctgcaaggggttatccaa
gaacctgatgagatccctgatcgtgtttag
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