Rhincodon typus (whale shark): 109929477
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Entry
109929477 CDS
T06055
Symbol
atf2
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-2 isoform X1
KO
K04450
cyclic AMP-dependent transcription factor ATF-2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04010
MAPK signaling pathway
rtp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109929477 (atf2)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
109929477 (atf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109929477 (atf2)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, CRE-BP/ATF
109929477 (atf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
zf-C2H2
Cnn_1N
TolA_bind_tri
TPD52
Motif
Other DBs
NCBI-GeneID:
109929477
NCBI-ProteinID:
XP_020384777
LinkDB
All DBs
Position
7:42844943..42984838
Genome browser
AA seq
495 aa
AA seq
DB search
MSDDKPFVCTAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARNDSVIVADQTPTPTRFLKN
CEEVGLFNELASPFENEFKKASEDDIKKMPLDMSPLALPAVRTKVEDMPIVETTHQNSPL
PHPESTTSDEKDAPLQQTQTVSTIRPASLQVPNVLLANSETGVVIQQALPSPTSTSVITQ
TPPTNRNIVPVSGSVPLLLQLPNGQTMPVTIPASITNPSVRIHTTVPIIRPVTMVPNIPG
IPGPPVSNIEPSSPQPLQSEAKLRLKAALTQQLPQVTNGNNSIGQTSGTMRIQTKETHPQ
SLQEAATSTTQPMSSPGQPTQQVQTSGGRRRRAMNEDPDEKRRKFLERNRAAASRCRQKR
KVWVQSLEKKAEDLSSTNVQLQNEVTLLRNEVAQLKQLLLAHKDCPVTAMQKKSGYHNVE
KDENSIDSPLPSSPQTQVIQHSSISTSNGISSTAMAEAVATSVLTQMADQSSEINLPVQS
HVTIAPSSQSQSSAS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgataaaccctttgtttgcaccgctcctggatgcggccagcgcttcacgaat
gaggaccacttggctgttcacaaacacaaacatgagatgacattaaagtttggtccagct
cgcaatgacagtgtcatagtggctgaccaaactccgactccaactcgtttccttaagaat
tgtgaagaagtagggctatttaatgaactggcaagtccgtttgaaaatgaatttaagaag
gcatcagaagatgacatcaaaaagatgcccttggacatgtcaccacttgcattaccagca
gttaggactaaagtggaagatatgccaattgtggaaacaactcatcagaatagtcccctc
cctcacccagagtcaaccaccagtgatgaaaaggatgccccattacaacaaacacaaact
gtatcaactattcgtccagcatctttgcaagttcctaatgtgctacttgcaaattcagaa
actggtgttgtcatacaacaggctttgccctctccaacctctacttctgtcatcacacag
actccaccaacaaacagaaatatagtaccagtatctggttcagttcctctcttgttacag
ctacctaatggacagaccatgcctgtcactattcctgcatcaatcacaaacccatctgtc
cgtattcatacaacagttcccattatcaggcctgtcaccatggtgcctaatatccctgga
attccaggtcctccagttagcaacattgaaccttcctctccacaacctcttcagtcagaa
gctaaactgcgactgaaggcagctttaacacaacagctccctcaggttactaatggtaat
aattccattggtcaaacaagtggcacaatgaggattcaaacaaaggaaacacatccacag
tcactgcaggaagctgcaacttccactactcaaccaatgagctccccaggccagcctaca
caacaggtccagacgagtggtggtaggaggaggcgagcaatgaatgaagatccagatgaa
aagaggcggaagtttttagaacgtaaccgagcagctgcttcaaggtgcagacagaagaga
aaagtctgggtgcagtctcttgaaaagaaggcggaggatctcagttcaacaaatgtccaa
ctacagaatgaagtcaccctgctgagaaatgaagtggctcagctgaagcagctacttctg
gctcataaagattgccctgtaacagccatgcagaagaaatctggctatcacaatgtagaa
aaggatgagaattctatagacagcccgctacccagcagcccccaaacccaagtcatccaa
cacagttctatcagcacttcaaatggtataagttcaacggcaatggcagaggctgttgct
acttctgttctcacccagatggcagaccagagttcagagataaacctacccgtccagtct
catgttaccattgctccttcgtctcagtctcaatcttcagcaagttga
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