Rhincodon typus (whale shark): 109929559
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Entry
109929559 CDS
T06055
Symbol
egf
Name
(RefSeq) pro-epidermal growth factor
KO
K04357
epidermal growth factor
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04010
MAPK signaling pathway
rtp04012
ErbB signaling pathway
rtp04020
Calcium signaling pathway
rtp04068
FoxO signaling pathway
rtp04510
Focal adhesion
rtp04518
Integrin signaling
rtp04540
Gap junction
rtp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109929559 (egf)
04012 ErbB signaling pathway
109929559 (egf)
04068 FoxO signaling pathway
109929559 (egf)
04020 Calcium signaling pathway
109929559 (egf)
09133 Signaling molecules and interaction
04518 Integrin signaling
109929559 (egf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109929559 (egf)
04540 Gap junction
109929559 (egf)
09142 Cell motility
04810 Regulation of actin cytoskeleton
109929559 (egf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtp04052
]
109929559 (egf)
Cytokines and neuropeptides [BR:
rtp04052
]
Cytokines
Growth factors (RTK binding)
109929559 (egf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
cEGF
FXa_inhibition
EGF_CA
EGF_3
EGF
Vgb_lyase
SGL
hEGF
EGF_MSP1_1
Plasmod_Pvs28
DUF6377
Motif
Other DBs
NCBI-GeneID:
109929559
NCBI-ProteinID:
XP_048461244
LinkDB
All DBs
Position
1:complement(119769098..119849623)
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AA seq
748 aa
AA seq
DB search
SAERSNGNICKKDPEDRCECKDGFVLSDDQNSCEDVNECAFWNHGCTLGCENFPGSYRCY
CPEGFVLLPDMKTCHDPIPCLENYTECSHDCIQTSKGPICVCPPGSILGSDGKTCSGCTA
PDNGGCGQICVLQNPVSWKCECLPGYQLQLDGQHCAASGPRPFLLFANSQDIRRINFDGT
DYHIVLERQMGRVFALDYDPVQNKIYFAHTGLKWIERANLDGSEREELISNDLDLPEGLA
VDWINRKLYWTDRGLSHIERSELNGMHREVIINEGIDTPRGIIVHPLAKRLFWTDWGDKP
RIETSSLEGDGRLVIVSTNLMWPSGIAIDYLTDKLYWCDTKQSVIEMSDLDGSNRRILAQ
NEVGRPFGVAVFEDHVWFTDWSKPSLMRVDKSTGHNRVRLRGGMIRPSSLAVVHPIAKPA
SRKTSSHEVNVLIATTLQKEEVSPTQPSSSVTNFNEDEITAELQPRSTLVAEIMVSDQDD
CGMLECDLNAQCFAPEGIGRCQCLEGFTGNGTICSDIDECATDASLCSRHLADCINTEGG
YVCKCHPGYSGDGLLCYGVIGSALPTDDSMEITVRSTTFETPTHKQNNHIATCPLSHQDF
CLNGGVCFHIPEITMFACNCLKGYMGERCEYSDLQWWELHRVEEEKRRNVLIAICVVVLI
CLLSVGACVTHCYRHQKHLKKSQYSEEISDTSSSSINNVTDTSTNNEQQFYTVVETNWKI
GEARTIRIIRTQNHTQATASVYLDTVLK
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
tctgcagaaaggagcaatggaaacatctgcaaaaaagacccagaagatcgctgtgagtgt
aaagatggctttgttctgagtgatgatcagaattcctgtgaagatgtcaatgaatgtgcc
ttttggaaccatggctgcactctaggctgtgagaactttccaggctcttatcgctgctac
tgcccagaaggctttgtactgctgcctgatatgaaaacttgtcatgatcctattccttgt
ttggaaaattacaccgaatgtagccatgattgcatccagacatccaaaggaccaatctgt
gtctgtccaccaggatctattttaggatctgatggaaaaacatgttcaggttgcactgcg
ccagataatggtggctgtggccagatctgtgtactgcagaatccagtatcttggaaatgt
gaatgtctgcctggttatcagctacaacttgatgggcagcactgcgctgcctcaggtccc
agaccatttttattatttgcaaatagccaggacataaggcgcataaactttgatggaaca
gattaccatattgtgctggaaagacaaatgggcagagtctttgcgcttgattatgaccct
gtgcaaaataagatttattttgctcacacaggcctgaagtggattgaaagagctaatctg
gatggttctgagcgtgaggaacttattagcaatgatctggatttacctgaaggactagct
gtggactggattaaccgcaaattatactggactgacagagggttatcacacattgagagg
agtgaactcaatggcatgcatagagaagtgatcatcaatgaaggtatcgatacgccaaga
ggaattattgttcatccattggcaaagagactattctggactgactggggagataaacct
agaatagaaacctcttctctggaaggtgacggtcgtttggtgatagttagcactaacctc
atgtggcccagtggaatagccatagactacctaacagacaagctgtactggtgcgatact
aaacaatctgtcattgagatgtcagatctagatggatccaaccgtcggatacttgcacag
aacgaagtaggacgtccctttggtgtggcagtatttgaagatcatgtttggtttacagac
tggagcaaaccttcccttatgagagtggataagtcgacgggtcacaatagagtgcgactc
cgaggtggaatgatccgaccttcatctttagctgtagttcatccaatagccaaaccagct
tccagaaaaacatcatcccacgaggtaaatgtgttaatagccacaacattacaaaaggag
gaagtgtcacccacacaaccgagttcctccgttaccaatttcaatgaggacgagattaca
gctgagctccagccaagatccacgcttgtggcggagataatggtatcagatcaagatgac
tgtggaatgctggaatgtgatctcaatgctcaatgttttgccccagaaggaattggtaga
tgccagtgtttggaaggatttactggcaatggcacaatctgcagtgatattgatgaatgt
gccactgatgcttccctttgcagcagacacctagcagattgtattaacacagagggcggc
tacgtctgcaaatgccatcctggctatagtggtgacgggctcctctgttatggtgtgatc
ggctcagccttgcctactgatgactcgatggagataactgtcaggagcactacttttgaa
actccgacacacaagcaaaataatcacattgcgacttgcccgctctcgcatcaggacttc
tgtctgaatggaggggtttgtttccatatccctgagataacaatgtttgcatgcaactgt
ctgaaaggctacatgggggaacgatgtgaatacagcgacttacaatggtgggagctgcat
cgtgttgaggaagagaagagacgtaatgtgcttatagctatatgcgtggtagtgttaatc
tgtctgctgtctgtgggagcttgtgttacacactgctacaggcaccagaaacacttgaag
aagagccaatactctgaagaaatcagtgacaccagcagcagcagcattaacaatgtaact
gacacatcgacaaacaatgagcagcagttttacactgtggtggaaactaattggaagatt
ggagaagcgcgtacaatccgtattatcagaacacaaaaccatacccaggccacagcatca
gtttacctggacactgttttaaaataa
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