KEGG   Rhincodon typus (whale shark): 109930946
Entry
109930946         CDS       T06055                                 
Name
(RefSeq) tumor necrosis factor ligand superfamily member 6-like
  KO
K04389  tumor necrosis factor ligand superfamily member 6
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04010  MAPK signaling pathway
rtp04060  Cytokine-cytokine receptor interaction
rtp04068  FoxO signaling pathway
rtp04210  Apoptosis
rtp04217  Necroptosis
rtp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    109930946
   04068 FoxO signaling pathway
    109930946
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    109930946
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    109930946
   04217 Necroptosis
    109930946
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109930946
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtp04147]
    109930946
   04052 Cytokines and neuropeptides [BR:rtp04052]
    109930946
   04090 CD molecules [BR:rtp04090]
    109930946
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   109930946
Cytokines and neuropeptides [BR:rtp04052]
 Cytokines
  Tumor necrosis fators
   109930946
CD molecules [BR:rtp04090]
 Proteins
  109930946
SSDB
Motif
Pfam: TNF PepSY_TM Silic_transp
Other DBs
NCBI-GeneID: 109930946
NCBI-ProteinID: XP_020385909
LinkDB
Position
10:complement(12770082..12773830)
AA seq 242 aa
MEPDFRYPQVYTVGSNLNSDYCSTVSALPVMVPTMKKRTTDWHKACTVVILILALLILTG
MAFGSFHLFQLHQKLNKLKQDQDSEGQQEKIIGSAEISKSTEVVAHVTGMNVIRNSNTLV
WDAEKGLALTKGVSYNAGALVINEAGNYLIYSKVFFRGQECTSDISLEHTVFKRTKLYPK
DIQLMVNSNGNSCPENRAQWTRSSFQAGIFNLKQNDHIYVNVSDPKFVSFDQFNTYFGLH
KI
NT seq 729 nt   +upstreamnt  +downstreamnt
atggagcctgatttcagatacccccaggtttacactgtgggcagtaatctgaactccgat
tattgttccacagtttctgcgcttccagtaatggtgccaacgatgaagaaaaggacgact
gactggcataaagcatgcactgttgtgattctgatcctagcactcttaatattgacaggc
atggcatttggcagcttccatttgtttcaactccatcagaaactcaacaaactaaaacag
gatcaggatagtgaaggtcaacaagaaaagattatcggatctgcagagatcagtaaatca
actgaagttgttgcacatgttacaggaatgaacgtcattaggaattccaatacactcgtg
tgggatgctgagaagggtcttgccttgaccaaaggagtaagctacaatgcaggagcattg
gttatcaatgaagctggaaactacttaatttactctaaagtgttcttccgtgggcaggag
tgtacatcggacatttctctggaacatactgtgtttaaacgaactaagctctatcctaaa
gatattcaactcatggtaaacagcaatggcaacagttgtcccgagaatcgtgcacaatgg
acaagaagtagctttcaagcaggaatttttaacttgaaacaaaatgatcacatatatgtc
aatgtctcagatcctaaatttgtaagctttgatcagtttaacacatattttggattacat
aagatttaa

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