Rhincodon typus (whale shark): 109932367
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Entry
109932367 CDS
T06055
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00280
Valine, leucine and isoleucine degradation
rtp00650
Butanoate metabolism
rtp00900
Terpenoid backbone biosynthesis
rtp01100
Metabolic pathways
rtp03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
109932367 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
109932367 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
109932367 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
109932367 (hmgcs1)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
109932367 (hmgcs1)
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GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Motif
Other DBs
NCBI-GeneID:
109932367
NCBI-ProteinID:
XP_020387184
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All DBs
Position
3:complement(123569150..123592584)
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AA seq
590 aa
AA seq
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MVSSSVDVTSPSHSLNMFRTFTKLSRLMYAESVCAGQNLSFQSRRVIFSTCLQVAVKVKF
PVTRSLSTMPGSLPANAEASWPKDVGIIAMEIYFPSQYVEQTELEKFDGVDAGKYTVGLG
QSRMGFCSDREDINSLCLTAVHRLLERNNLPYESIGRLEVGTETIIDKSKSVKTVLMQLF
EESGNTDIEGIDTTNACYGGTAALFNSVNWVESSSWDGRYALVVAGDIAVYATGSARPTG
GAGAIAMLVGPNAPLGFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDHC
YKVYCDKYQAQKQKEGSDARFTLQDFDYMVFHTPYCKLVQKSVARLLVNDFLHDSNPNTE
SGVFSGLEAFRDVKLEDTYFDRDVEKAFLKASTDIFKQKTQPSLMLSNQNGNMYTPSVYG
CLSSVLSQRSAQQLAGQRIGLFSYGSGFAATLYSLRITQDATPGSALDKLVSSLSDLQAR
LDSRKKVSPEIFASSMKLREETHHLANHQPQGAVEDLFPGTWYLTRVDEKHRRDYARRPI
LESGSFEAGPGVLQSKTNAAECAPSPAKKMPRIPATAAQAGTANVSNGEH
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggtcagtagctcagtggatgtcactagtccctctcattctctcaacatgttccgaacc
tttaccaaactcagccgacttatgtatgcagagagcgtgtgtgctggacaaaacctcagc
ttccagagcaggcgggttatcttctcaacttgcctacaagtagctgtcaaggttaagttc
ccagtgacaaggagtctttccacaatgcccggatcacttcctgccaacgctgaggctagc
tggcccaaggatgtgggaatcattgccatggagatctacttcccatctcagtatgtggag
cagacagagctggagaagttcgatggggtggacgcgggcaagtacactgtcggcctgggc
cagtcgaggatgggcttctgctctgaccgtgaggacatcaactccctgtgcctgacggcc
gttcaccggctgctggagaggaacaacctcccatacgagagcatcgggcgactggaggtg
ggcacagagaccatcattgacaagtccaagtcggtgaagaccgttctgatgcagctgttc
gaggagtccgggaacactgatatcgagggcattgacaccaccaacgcctgctatggtgga
accgctgcactcttcaactctgtcaactgggtggagtctagctcctgggatgggcgctac
gcattggttgttgctggtgacatcgcagtctatgctaccggcagtgcccgtcccaccggt
ggtgccggtgccattgccatgttggttggtccaaatgctccactgggatttgagcgagga
ctccggggaacacacatgcaacatgcgtacgatttctacaagccagacatggtgtcggag
tacccagtggtggatgggaagctttccatacagtgctacctcagcgcgttagatcactgc
tacaaagtttactgtgacaagtaccaggcacagaagcaaaaagagggcagcgatgctcgc
tttactttgcaggattttgactacatggtgttccataccccttactgcaaactggtccag
aaatccgtggcccggctgcttgtcaacgatttcctacatgactctaaccccaacacagag
agtggtgtcttcagcggcctcgaggccttcagagatgtgaaactggaggacacttacttc
gatcgggatgtggagaaagctttcctgaaggcaagcaccgatatctttaagcagaagacg
cagccatcactgatgctttccaaccagaatgggaacatgtacacgccgtctgtctacggc
tgcctgtcctctgtattaagccagcgctctgcccagcagttggccggccagaggattggc
ctgttctcctatggctcaggatttgctgctaccctgtactcactccgcatcactcaagat
gcgacaccaggatctgcgctggacaagctggtgtccagtttgtcagacctgcaggccagg
ctggactcgcgcaagaaggtgtcaccagaaatattcgcctccagcatgaagctgagggag
gagacccatcatttggcgaaccaccagccccagggtgcagtggaggacctgttccctggc
acgtggtatctcacccgggtggatgaaaagcatcgccgtgactatgctcggaggcctatc
ctggagagtggcagctttgaggctgggccaggtgttctccagagcaaaaccaacgcagct
gagtgtgcaccaagccctgccaagaaaatgcccaggatcccagcaacagctgcacaagct
ggtactgctaacgtcagcaacggagagcactga
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