Rhincodon typus (whale shark): 109932650
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Entry
109932650 CDS
T06055
Symbol
fbxw7
Name
(RefSeq) F-box/WD repeat-containing protein 7 isoform X2
KO
K10260
F-box and WD-40 domain protein 7
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109932650 (fbxw7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109932650 (fbxw7)
04121 Ubiquitin system [BR:
rtp04121
]
109932650 (fbxw7)
Membrane trafficking [BR:
rtp04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
109932650 (fbxw7)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109932650 (fbxw7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR55
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
F-box
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_IFT140_2nd
Beta-prop_VPS8
PQQ_2
WD40_RFWD3
Beta-prop_NWD2_C
WD40_like
CDtoxinA
Ge1_WD40
Beta-prop_IFT140_1st
KNTC1_N
eIF2A
PALB2_WD40
Beta-prop_WDR19_2nd
MgtE_N
Motif
Other DBs
NCBI-GeneID:
109932650
NCBI-ProteinID:
XP_020387386
LinkDB
All DBs
Position
1:128918209..129278564
Genome browser
AA seq
555 aa
AA seq
DB search
MGFYGTLKMIFFKMKRKLDPGPEVRSFSSGKKPCKGSEYKSSTTGLVPCSATPTTFGDLR
AANGQGQQRRRITSVQPPPELQDWLKTFQSWSGPERLLALDELIDSCEPTQVKHMMQVIE
PQFQRDFISLLPKELALYVLSFLDPKDLLQAAQTCRYWRVLAEDNLLWREKCKEEGIDEP
VYIKRRKVIKPGFAHSPWKSAYIRQHRIDTNWRCGDLKTPKQVLKGHDDHVITCLQFCGN
RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRGNIIISGSTDRTLKVWNADSGE
CIHTLYGHTSTVRCMHLHENRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR
RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN
CIHTLTGHQSLTSGMELKDNTLVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF
NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT
EETKLLVLDFDVDMK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggtttctacggcactttaaaaatgatcttttttaaaatgaagagaaaattggaccct
ggccctgaggtccggtctttctcttcagggaagaaaccttgcaaaggttcagaatacaaa
agcagcaccacagggctggttccatgttcagcaacacctaccacctttggcgacctgaga
gctgcaaatggacaagggcaacagcggcgtcggatcacaagtgtccagccacctccagaa
ctgcaagattggctgaagacttttcagagttggagtggaccagaaagattacttgcatta
gatgaattgattgacagttgtgaacctactcaagtaaagcacatgatgcaagttatagaa
ccccagttccaacgagatttcatatcactgcttccaaaagagctagccctgtatgttctg
tcattcctggatcccaaggacctgctgcaggcagcacagacctgccgctattggagagta
ctggctgaagacaacctactttggagagaaaaatgtaaagaggaaggaattgatgaacct
gtatacatcaaaaggagaaaagtgatcaaaccaggctttgctcacagcccttggaaaagt
gcttatatccgacaacacagaatagatactaactggcgctgtggagatctaaagacccca
aagcaggtgctgaaaggtcatgatgatcatgtgatcacgtgcctacaattctgtggtaac
cgaattgtcagtggttctgatgacaacacactgaaagtgtggtcagctgttacaggaaag
tgtttaagaacattagtaggacatacgggtggtgtctggtcatcccagatgagaggcaat
atcattataagcggatccactgaccgaacattgaaagtatggaatgcagattctggtgaa
tgtattcacacactctatggtcatacctccactgtgcgttgcatgcacctccatgaaaat
cgagttgtgagtggctctcgagatgctactcttcgtgtctgggacattgaaacaggacag
tgtttacatgtgttgatgggtcatgttgcagctgtgcgatgtgtacagtatgatggaaga
agagttgttagtggggcatatgatttcatggttaaggtgtgggaccctgaaacagaaacc
tgtctacatacactacagggacacactaacagggtctattcattacagtttgatggtatc
catgtagtaagtggttcacttgatacctctattcgcgtatgggacgtggagactgggaat
tgtattcacacattaacgggacatcagtcattaactagtggaatggaactgaaggacaac
acacttgtttctggaaatgcagattccacagtgaaaatctgggacatcaaaacaggacag
tgtttacaaacattacaagggcctaacaaacatcagagtgctgtgacatgcctccaattc
aacaagaactttgtgataactagctcagatgatgggactgtaaaactttgggacctgaaa
acaggagagttcattcgaaatttggttacactggaaagtggaggcagtggaggtgttgtc
tggcgaatcagagcatcaaatacaaagcttgtgtgtgcagtaggaagcagaaatgggact
gaagaaacaaagttgcttgtattggactttgacgtggacatgaagtga
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integrated database retrieval system
