Rhincodon typus (whale shark): 109932975
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Entry
109932975 CDS
T06055
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109932975
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
109932975
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_2
HEAT
V-ATPase_H_C
ELMO_ARM
Adaptin_N
Cnd1
Arm_2
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
109932975
NCBI-ProteinID:
XP_048468153
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All DBs
Position
25:complement(25631983..25669011)
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AA seq
641 aa
AA seq
DB search
MKECSRTETYATGIPREYLQKNHFSSFSVKGNRTISMPSYYRKNSGPQSPLGENEVFYRG
VASSRSEPDLLNMQNTQTLRRLRSKSRPVDWTKSLHARRNVVRHFSMLPDTKSHEKGRLN
LSTSGIRSIKRGSTIHRTANEIRDFDSNMNLKKAVMLLSDQDPSVLAYAASYIQHECFKE
DMAKTAISEMNAIPQLINLLGIKNNNVQQSVCGALRNAVYKNVNNKLEVKKNGGIKPILQ
ILRETNDLETQKQITGLLWNLSSCDDLKEVLIKDALPALTESVIIPHTSEEYGNPRINDS
NVFYNATGCLRNLSSAGQEGRQMMRNCNGLIDSLMTYTQACINANQADAKSVENCVCILH
NLTYHLDTEVPAVFSHINGKGSVRSQNRMTKKSSVGCFSPGNDQFDEPDLDNMPFLKEDD
NPKGVNNLSHSKAIKMYTSLLGKSKSDATLEACAGALQNLTASNNMSSYLMSSTIVNKEK
ALPRVANLLQSSNPDIQKTAVSLLNNMSRHNSLQPDLASQTLPELARLLPGGGSSSKTSD
DTIASACNIMRNLVPSNTAIAKTVLQGSMLNNLMSLSKSSAYPSAGKAACLFLYEMWAQK
DLQNFFKREGFSKKDFVNHLTSAAVKLAQQNAGTFQSKKFL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatgttctcgcacggaaacatatgcaacaggaatcccaagagaatacttgcaa
aagaaccatttcagctccttcagcgtgaaggggaaccgaacaatcagcatgccatcatac
tatcgaaaaaattctggcccacaaagtccactgggtgagaatgaagtcttctatagaggc
gtggcaagcagtcgaagtgaaccagatctcctaaatatgcaaaacacacagactttaaga
aggctgagaagcaagtcccgacctgtagattggaccaagagccttcatgcaaggcgaaat
gttgtccgccatttctcaatgctcccagatactaaaagtcatgaaaaaggtcggttaaat
ttatcgacttcagggattcgaagtatcaaaagaggaagtactattcatagaacagcaaat
gaaatacgagactttgacagcaatatgaatctaaaaaaagcagtgatgcttttatccgat
caggatcccagtgttctggcctacgctgcttcttacattcagcatgagtgcttcaaggag
gacatggctaaaacagcgatttctgaaatgaatgcaattcctcaactgatcaacctcttg
ggaatcaaaaataacaacgttcagcagtctgtctgtggagctcttcgaaatgcagtctac
aagaacgtcaacaacaagcttgaagtaaagaaaaatggtgggatcaaaccaatccttcag
atcctgagagaaacaaatgatctggaaacacaaaagcaaataactggactcttgtggaac
ctttcatcatgtgatgacctcaaggaagtcttgattaaagatgccctgccagccctgact
gagtctgtgattattccacatacttctgaggaatatggaaatccaagaatcaacgattcc
aatgttttctacaatgccacaggatgtctaaggaacctgagctctgctggtcaagaaggc
cggcagatgatgcgcaactgcaatggattgattgattctcttatgacttatactcaagca
tgtatcaatgcaaaccaagctgatgcaaagtcggttgaaaactgtgtttgcatcctacat
aacctcacataccacttggatactgaagtgccagctgtgttcagccacattaatgggaaa
ggaagtgtacggagccaaaacagaatgacaaagaagtcctctgtgggctgtttcagccct
ggaaatgatcagtttgatgagcctgatttagataatatgcctttcctgaaagaggatgac
aatccgaaaggtgttaacaatctttcacactcaaaagcaatcaaaatgtacacatccctt
ttgggtaaatccaagtctgatgccacactcgaagcttgtgcgggagctctgcagaacctt
actgccagcaacaacatgtcatcatacctgatgagttcaaccatagtaaacaaggaaaag
gcacttcctcgggtcgcaaaccttctccagtctagcaacccagacatacagaaaactgca
gtttcactgctgaacaacatgtcaaggcataatagtctgcaaccagatttggcatctcag
acattgccagagttagcacgacttctccctggaggaggtagtagctccaagacttcggat
gacaccatcgcttccgcctgtaatattatgcgaaatctggtgcccagtaatactgccata
gcaaaaacagtactacagggttcgatgttgaataatctaatgagcctcagtaaatccagt
gcctacccctcagctggcaaagctgcctgtctcttcctgtatgaaatgtgggcgcagaaa
gacttgcagaatttcttcaaaagggaaggtttcagcaagaaggactttgtaaatcatctg
acttcagctgctgtcaaattagctcagcagaatgcagggacgttccaaagtaaaaaattc
ctttaa
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