KEGG   Rhincodon typus (whale shark): 109933327
Entry
109933327         CDS       T06055                                 
Name
(RefSeq) hepatic lectin-like isoform X1
  KO
K06563  C-type lectin domain family 4 member L/M
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03260  Virion - Human immunodeficiency virus
rtp03264  Virion - Flavivirus and Alphavirus
rtp03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
rtp03273  Virion - Lassa virus and SFTS virus
rtp04145  Phagosome
rtp04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03260 Virion - Human immunodeficiency virus
    109933327
   03264 Virion - Flavivirus and Alphavirus
    109933327
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    109933327
   03273 Virion - Lassa virus and SFTS virus
    109933327
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109933327
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    109933327
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109933327
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:rtp04054]
    109933327
   04515 Cell adhesion molecules [BR:rtp04515]
    109933327
   04090 CD molecules [BR:rtp04090]
    109933327
   04091 Lectins [BR:rtp04091]
    109933327
Membrane trafficking [BR:rtp04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    109933327
Pattern recognition receptors [BR:rtp04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   109933327
Cell adhesion molecules [BR:rtp04515]
 Lectins
  Selectins and C-type lectins
   109933327
CD molecules [BR:rtp04090]
 Proteins
  109933327
Lectins [BR:rtp04091]
 C-Type lectins
  Asialoglycoprotein and DC receptors
   109933327
SSDB
Motif
Pfam: Lectin_C Chordopox_A33R HIP1_clath_bdg CCDC90-like MRS2-like HisKA_3 Prominin AKNA
Other DBs
NCBI-GeneID: 109933327
NCBI-ProteinID: XP_048473822
LinkDB
Position
38:19495406..19516329
AA seq 201 aa
MKMAETDFKMDLAQLQSNVTLLFSLMKIVETDFKKNNAQLQSNVTGLSEKTNRSLSELRN
HISQLKKKLLWKCSEHWRRFQQKCYYFSSDSKSWTEAQRSCASMDANLLVINKPEEQGFV
KKWLQHKDYWIGLTDSIAEGDWRWMDGTDYNSSVKFWKKGEPNDASNEDCAEIYGDGGWN
DQSCDASLHWICEKPAQFVSP
NT seq 606 nt   +upstreamnt  +downstreamnt
atgaaaatggcagaaactgacttcaagatggatcttgcccaattacaaagtaacgtaaca
ctgctcttcagtctcatgaaaatagtagaaactgacttcaagaagaataatgcccaatta
caaagtaacgttacaggattatctgagaagacaaacagatcactcagtgaacttaggaat
cacatttctcagctgaagaagaaactgctttggaagtgttctgaacactggaggcgattc
cagcaaaagtgttattacttttcatcagacagcaagagctggacagaggcccagagatcc
tgtgcatcaatggatgccaatcttcttgtcattaacaagcctgaggagcagggatttgta
aaaaagtggctccaacacaaagattactggattggactcactgattctatcgcggaaggt
gattggcgctggatggatgggacggactacaattcctctgtaaaattttggaagaagggt
gaaccaaatgatgcttccaatgaagactgtgcagaaatatatggtgatggaggttggaat
gatcaatcatgtgatgcctctctacattggatctgtgaaaagccagcacagtttgtttct
ccttaa

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