Rhincodon typus (whale shark): 109933327
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Entry
109933327 CDS
T06055
Name
(RefSeq) hepatic lectin-like isoform X1
KO
K06563
C-type lectin domain family 4 member L/M
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03260
Virion - Human immunodeficiency virus
rtp03264
Virion - Flavivirus and Alphavirus
rtp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
rtp03273
Virion - Lassa virus and SFTS virus
rtp04145
Phagosome
rtp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
109933327
03264 Virion - Flavivirus and Alphavirus
109933327
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
109933327
03273 Virion - Lassa virus and SFTS virus
109933327
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109933327
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109933327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109933327
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rtp04054
]
109933327
04515 Cell adhesion molecules [BR:
rtp04515
]
109933327
04090 CD molecules [BR:
rtp04090
]
109933327
04091 Lectins [BR:
rtp04091
]
109933327
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Phagocytosis
C-lectin receptors
109933327
Pattern recognition receptors [BR:
rtp04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
109933327
Cell adhesion molecules [BR:
rtp04515
]
Lectins
Selectins and C-type lectins
109933327
CD molecules [BR:
rtp04090
]
Proteins
109933327
Lectins [BR:
rtp04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
109933327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Chordopox_A33R
HIP1_clath_bdg
CCDC90-like
MRS2-like
HisKA_3
Prominin
AKNA
Motif
Other DBs
NCBI-GeneID:
109933327
NCBI-ProteinID:
XP_048473822
LinkDB
All DBs
Position
38:19495406..19516329
Genome browser
AA seq
201 aa
AA seq
DB search
MKMAETDFKMDLAQLQSNVTLLFSLMKIVETDFKKNNAQLQSNVTGLSEKTNRSLSELRN
HISQLKKKLLWKCSEHWRRFQQKCYYFSSDSKSWTEAQRSCASMDANLLVINKPEEQGFV
KKWLQHKDYWIGLTDSIAEGDWRWMDGTDYNSSVKFWKKGEPNDASNEDCAEIYGDGGWN
DQSCDASLHWICEKPAQFVSP
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcagaaactgacttcaagatggatcttgcccaattacaaagtaacgtaaca
ctgctcttcagtctcatgaaaatagtagaaactgacttcaagaagaataatgcccaatta
caaagtaacgttacaggattatctgagaagacaaacagatcactcagtgaacttaggaat
cacatttctcagctgaagaagaaactgctttggaagtgttctgaacactggaggcgattc
cagcaaaagtgttattacttttcatcagacagcaagagctggacagaggcccagagatcc
tgtgcatcaatggatgccaatcttcttgtcattaacaagcctgaggagcagggatttgta
aaaaagtggctccaacacaaagattactggattggactcactgattctatcgcggaaggt
gattggcgctggatggatgggacggactacaattcctctgtaaaattttggaagaagggt
gaaccaaatgatgcttccaatgaagactgtgcagaaatatatggtgatggaggttggaat
gatcaatcatgtgatgcctctctacattggatctgtgaaaagccagcacagtttgtttct
ccttaa
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