KEGG   Rhincodon typus (whale shark): 109933571
Entry
109933571         CDS       T06055                                 
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rtp03037]
    109933571 (ift122)
Cilium and associated proteins [BR:rtp03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   109933571 (ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 Zn_ribbon_IFT122_C WD40_WDHD1_1st WD40 Beta-prop_EML_2 WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR19_1st TPR_GEMI5 Beta-prop_NUP159_NUP214 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML TPR_IFT80_172 Beta-prop_WDR35_TULP_N TPR_IF140-IFT172 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_IFT140_1st eIF2A B-prop_COPA_B_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT140_2nd Beta-prop_NWD2_C TPR_COPA_B Beta-prop_SPT8
Other DBs
NCBI-GeneID: 109933571
NCBI-ProteinID: XP_048462194
LinkDB
Position
16:complement(52346831..52442045)
AA seq 1187 aa
MRAVPTWIDRVHDREKVEQCIYDIAFKPDGTQLIVAAGNRVLVYDTSDGTLIQPLKGHRD
TVYCVAYAKDGKRFASGSTDKSIIIWTSKLEGILKYTHNDSIQCIAYNPVTHQLASCSSS
DFGLWSPEQKSVSKHKVNSKITCCSWTNDGQYLAISLFSGIVSIRSKSGEEKVRIERPGA
VPIWSICWNPSKDEHTDILAVADWGQRLSFYQLSGKQIGKDRALNFDPCCVSYFSKGEYI
VMGGSDKQVSLYTKDGVRLGSIGEQQSWVWTCRVKPDSNYVVVGCQDGTIAFYQIIFSTV
HGLYKDRYAYRDSMTDVIVQHLITEQKVRIRCRELVKKIAIYKNRLAIQLPEKILIYELF
SEDNTDMHYRVKEKITKKFECNLLVVCSQHLILCLEKRLQCLSFSGVKEREWLMESLIRY
IKVIGGPSGREGLLVGLKNGQILKIFVDNPFAIVLLKQATSVRCLDMSTSRNKLAVVDEH
NTCLVYDISTKELLFQEPNANSVAWNTQCEDMLCFSGGGFLNIKASNFPVHQQKLQGFVV
GYNGSKIFCLHVYAMSAVEVPQSAPMYQYLEKKMYKEAYQIACLGVTENDWRDLAIEALE
GMDFDTAKKAFIRVRDLRYLELISSIEERKKHGENDNELFLADVHAYQAKFHEAAKLYKK
TGNNSRALNMYTDLCMFDYAKDFLGSGDPKDTKMLITKQADWARNINEPKAAAEMYLSAG
EHLKAIEIIGDHGWVDMLIDVARKLDKAEREPLSRCAYFLKKLQHPGYAAETYMKMGDLE
AQVLLHVETRHWEEAFALVARHPEFKDTVYVPYAQWLAENDQFEEAQKAFHKAGRQDEAV
KVLEQLTHNAVLESRFNDAAYYYWMLSMQCLDIARENTEKQQEMLKMFHHFQHLAELYHA
YHSIQRYTDEPFSSHLPEALFNISRFLLHNLTKETPLGISKVNTLYALAKQSKALGAYKL
ARHAYDKLQGLRIPARFQKSIGLGSLTIRSKPFHDSEDFVPMCYRCSTNNPLLNNQGNVC
INCRQPFVFSASSYEVLPLVQFYLEEGITDEEAVALIDREVPSTELKKDGWQEKNIGDAQ
TLQLDDSVTKIETDPFTAKLSFEQGGSDFVPVVVNREVLQSMSRRDVLIKRWPKPLRWHY
FRSLLPDVSITMCPTCFQMFHSEDYELLVLQHNCCPYCRRPIDEPSV
NT seq 3564 nt   +upstreamnt  +downstreamnt
atgcgggccgtccccacctggattgacagggtgcacgacagggagaaggtcgaacagtgt
atttatgatattgcattcaagccggatggaactcagttgatagtagcagcaggaaacaga
gtcctggtatacgatacttctgatggcactcttattcagccactcaaaggacacagggat
actgtatactgtgttgcttatgctaaagatggtaaacgatttgcatcgggttccactgac
aagagtattataatctggacttcgaagttggaaggcatcttgaaatacacacataatgat
tccattcagtgcattgcatacaacccagtcacacatcaactggcttcctgttcttccagt
gactttggtttgtggtcgccagagcagaaatctgtctccaagcacaaagtcaacagcaaa
atcacctgctgcagttggacaaacgatggtcagtacctggccattagcctgtttagtggt
attgtcagtattcgaagtaagagtggagaagagaaagtgagaattgagcgacctggtgct
gtcccaatctggtcaatttgctggaatccatccaaagatgaacacaccgacatcttagct
gtggcagactgggggcagcgactttccttttaccaattgagtgggaaacagattggaaaa
gacagggcactgaactttgacccctgttgtgtcagttacttctcaaaaggagagtatatt
gtgatgggaggctccgataaacaggtttctttgtacacaaaggatggagttcgtctcggt
agcattggggaacagcaatcctgggtgtggacctgcagagtgaagccagactccaattat
gttgttgtaggttgtcaagatggtacaattgccttttaccaaataatttttagcacggtg
catggactatacaaggaccgctatgcctatagggacagcatgaccgatgtcattgtacag
catctcatcacagaacagaaagtgcggatcagatgccgggaacttgtgaagaagattgct
atatataagaaccgactagcaatccagctgccggaaaaaatcctgatctatgagctcttt
tcagaagataatactgacatgcattaccgagtaaaggaaaagattaccaaaaaatttgaa
tgcaaccttttagttgtatgctcacagcatcttatcttgtgcctggaaaagagattgcag
tgcttgtcatttagtggtgtgaaggagagagaatggctcatggagtcacttattcgctat
attaaagtcatcggaggaccatcaggaagagaaggcctattagttggtctgaagaatggt
cagattctgaaaatatttgttgacaacccatttgccattgtgcttcttaagcaagctaca
tctgtacgctgtttagacatgagtacatcacgcaacaaactggctgtggtggatgaacac
aacacttgtctggtatatgacataagtacaaaagaactccttttccaggagccgaatgcc
aacagtgtggcttggaacacccagtgtgaagatatgctttgtttttctggtggtggtttt
ctcaacatcaaagccagtaattttccagtgcatcagcagaagcttcagggctttgtggtg
ggatataatggctccaaaatcttctgcttacatgtgtatgccatgtcagcagttgaagtc
ccacagtctgcacccatgtaccagtacttggagaagaaaatgtataaggaagcctatcaa
attgcctgcttgggtgtaacagagaatgattggagagacctagcaatagaggctttggaa
gggatggacttcgacactgctaaaaaggcatttatcagagtgcgggatctccgctatctg
gagcttattagcagcattgaggagcgtaaaaagcatggtgaaaatgacaacgagttgttt
ctcgcagatgtacatgcctaccaagccaagttccatgaggcagctaagctgtacaagaag
actggaaataacagtcgtgccttaaatatgtatactgacttatgcatgtttgattatgcc
aaggatttccttggctcaggtgatcccaaggacacaaagatgttgattactaaacaagca
gactgggccaggaacatcaatgaaccaaaagcagctgcagaaatgtacctgtctgcagga
gagcatctaaaagcaattgagatcattggggaccatggttgggttgatatgttaattgat
gtagctcgtaaattagacaaggctgagcgggaacccctatcaaggtgtgcctatttttta
aagaagctgcagcatcccggatatgccgcagagacatacatgaaaatgggagaccttgag
gcccaggtcttgctgcatgtagagaccaggcactgggaggaggcctttgctttggtggct
cggcacccagagttcaaagacactgtatatgtgccatatgcacagtggctggcggaaaat
gatcaatttgaagaagcccaaaaagcgtttcacaaggctggccggcaagatgaggcagtc
aaggttctggaacaactgactcacaacgcagttctggaaagccgtttcaatgatgctgcc
tattattattggatgttgtcaatgcagtgtctggacatagctcgagagaatacagagaag
caacaggagatgcttaaaatgtttcaccatttccaacacctggcggaactctaccatgca
taccactcaatccagagatatacggatgaaccttttagttcccatttacctgaagcactt
tttaacatctccagatttttacttcataatcttaccaaagaaacccctttaggcatctcc
aaagttaatactttatatgctctagccaaacaaagtaaggcgctgggagcatacaaactg
gcccggcatgcctatgacaaactacagggtcttcgcattcctgccaggttccagaagtcc
attgggctaggtagcctgacgattcgatctaagccattccatgacagtgaggactttgta
cctatgtgctacaggtgttcaaccaataatccactgctcaataaccagggaaatgtatgc
attaactgtcgacagccatttgtattctctgcttcctcttatgaggtgctgccacttgtt
cagttctatttggaagaagggatcacagatgaagaagcagtggccctgattgatcgagaa
gtgcccagcacagaactgaaaaaggacggctggcaggaaaagaatattggagatgcacag
actctacagcttgatgacagtgtgacaaagattgagacggacccattcactgcaaaattg
agctttgagcaaggaggctcagattttgttcctgtggttgtgaatagagaggttctgcaa
tcaatgagtaggagggatgttctgattaaacgctggccaaagccattaaggtggcactac
tttcgatcactgttacccgatgtctccattacaatgtgccctacatgtttccagatgttt
cacagtgaagactatgagctgcttgttctccagcacaactgctgtccatactgtcgccgg
ccaatagatgaacccagtgtctga

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