Rhincodon typus (whale shark): 109934048
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Entry
109934048 CDS
T06055
Name
(RefSeq) fukutin-related protein isoform X1
KO
K19873
fukutin-related protein [EC:2.7.8.-]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00515
Mannose type O-glycan biosynthesis
rtp01100
Metabolic pathways
Module
rtp_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
109934048
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109934048
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109934048
Glycosyltransferases [BR:
rtp01003
]
Glycan extension
O-Glycan
109934048
Membrane trafficking [BR:
rtp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
109934048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKRP_N
LicD
DUF6794
Motif
Other DBs
NCBI-GeneID:
109934048
NCBI-ProteinID:
XP_048474085
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All DBs
Position
39:7612121..7627963
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AA seq
501 aa
AA seq
DB search
MRVSFCQMLLTGAIMINLVILYYVSRTQQQMLKHKVPGKAASRKLAVSRVTGITVLIREF
EDFENWVVGVAQSFLKQKPDQPIVVVADKLPYPPLDLPNKQNIQVVLLKASPDQPYYVTR
PEFYINTEYTLLVPDGVQLDSTQQLDHLLQQFEANKGKVQMVAAPIQNGETFHCLNLRVS
LKEWTAVYQLSPAQVCDAIDGDAVVLLRTEDLFNFSQPMVRPLMTSLFVQSSLRGWKVKM
AENVVFSSYHRSLFMSAHNRWKADINTKARLSQLFKDFGVKHVVQPNGKEQWYGCNKDTP
RCFRTVHDDTPEYLYENRWTPPCCLKALRETTKYVINILESSGVRYWLEGGTLLGAVRHQ
DIIPWDYDVDLGIYLDDVENCEFLRSLDSGSVVDENGYVWEKAVEGDFYRVQYSESNHLH
VDLWPFYAREGIMTKNTWMDHKQDVNFPEHFLKPLVPMQFAGITALAPNNHRRFLELKFG
EGVIENPEYPNPAKKKLEKKD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttagtttttgccagatgctgctgactggggcaataatgattaatctagttatt
ctttactacgtctccagaactcagcagcaaatgctgaaacacaaagtcccagggaaggct
gcctccaggaaactagcagtttcaagagtcactgggatcactgtacttatacgagagttt
gaagactttgagaattgggtggtaggtgtagcacagtctttcctgaagcaaaagccagac
cagcccattgtggtggtggctgacaaactaccatacccacctctagacctgcccaataag
cagaacatacaggtagtgctattgaaggcatctccagatcagccatattatgtcaccagg
cccgagttctacatcaacactgaatacacccttctggtgcctgacggggtgcagttggac
tcaacccaacagcttgaccatcttcttcagcagttcgaggccaacaaaggaaaggttcag
atggtggcagctcctattcagaatggggaaacattccactgtctaaacttgcgtgttagt
cttaaggaatggaccgccgtctatcagctttctcctgctcaggtttgcgatgccattgac
ggagatgctgtggttcttcttcgaactgaggatttgttcaacttctctcagcccatggta
aggccgctcatgacatccctctttgttcagtcttcactgcgtggctggaaggtgaagatg
gcagagaatgtggtgttctcatcataccaccgctctttgttcatgtcagcccataaccgt
tggaaagcagacatcaatacaaaggcaaggctgtcccaactcttcaaagacttcggtgtg
aagcatgtggtgcagcccaatggaaaggagcagtggtacggctgcaacaaagacacccct
cgctgtttcaggacggtgcatgacgacacgcctgagtacctgtatgagaacaggtggacc
ccaccttgctgcctcaaagccttgcgtgagaccaccaagtacgtcataaacatcttggag
tcctcaggtgtccgctactggctggagggcggaactcttctgggagcagtccgtcaccag
gacatcattccatgggattatgacgtggaccttgggatttacctggatgatgttgaaaat
tgtgaatttctaaggagcctggactctggctcagttgttgatgagaacggctacgtgtgg
gaaaaggcagtggaaggtgacttctaccgtgtgcaatacagcgaaagcaaccacttgcat
gttgacttgtggcctttctatgccagagaaggaatcatgaccaaaaacacgtggatggac
cacaaacaggatgtgaatttccctgagcacttcctgaaaccactggtccccatgcagttt
gctggaataactgctcttgcccccaacaatcacaggcgcttcctggagttgaagtttgga
gagggggtcatcgaaaatcctgagtatccaaaccctgccaagaaaaagttggagaagaag
gactaa
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