Rhincodon typus (whale shark): 109934308
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Entry
109934308 CDS
T06055
Name
(RefSeq) E3 ubiquitin-protein ligase MSL2 isoform X1
KO
K13164
male-specific lethal 2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109934308
03036 Chromosome and associated proteins [BR:
rtp03036
]
109934308
Spliceosome [BR:
rtp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
109934308
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MSL complex
109934308
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_10
MSL2-CXC
Motif
Other DBs
NCBI-GeneID:
109934308
NCBI-ProteinID:
XP_020388718
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All DBs
Position
13:56814445..56825894
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AA seq
627 aa
AA seq
DB search
MDVGTAADTGRRRKRNRKYPRRRHHGPARSDLSAAAAMNPVNATGLYVTTCRYIMQCEPQ
EPGSFSELYKLLPYLRQSLSCCVCGNLLKEPIAPTNSTCQHYVCKTCKGKKMMMKPSCSW
CKDYEQFEENKQLSILVCCYKKLCEYIAESPISQHLATVMDGAPDILTLLQEGLSLDEER
QGTSALTSALNLSNSPTPSTSECTSDLEMATTPRIVENIQDSEQVSSKTELTCSSFNGLP
GCNGLSAGEFTVNIISSESSERLNTSCTEEDFKSRDISDSLQAVNEVVSCSNVNVVGVDI
CSYGGDIKPIGSLLFTGGHVFQDLETVANNLEACSNYSQSFSETSTPNGPVLDAKPISLP
PKSSIFVSSNAPPHGIPCVAATPKVVRGNRKRSRSESDSEKIQPLPISSIIHGPPLGAAA
PVPAKRETKLSTETVVTMPNGGTLKVGKSLLAASKSVKKHAEHGAKKSHSKVKQGTTKSK
SKEKVHSSTVMPGSPSKIAYKKPQEKKGCKCGRATQNPSVLTCRGQRCPCYSNRKACLDC
ICRGCQNSYMANGEKKLEAFAVPEKALEQTRLTVGISLTSISNAVRNASTSASVINVTTG
SPIPTFLAASPHDDKSLDETIDYRYDC
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggacgttggcaccgccgcggatactgggcgtcggagaaagaggaatcggaaatatccc
cgtcggcggcaccacggcccggcccgctccgacctctcagccgccgccgccatgaatccg
gtcaacgccactggcctgtacgtgacgacctgccgctacatcatgcaatgcgagccgcag
gagcccggctccttctcggagctctacaaactgctgccctacctgcggcagtccctctcc
tgctgtgtctgcggaaatctgctgaaagaaccaattgctcctacaaactccacttgccag
cactatgtttgtaaaacttgcaaaggtaaaaagatgatgatgaaaccctcctgtagttgg
tgcaaagattatgaacagtttgaagaaaataaacaactgagcatcctggtgtgctgctac
aagaaactttgtgaatatatagctgaatccccaatttcacagcatctagctaccgttatg
gatggtgctcctgacatcttaaccctgctgcaagagggactgtcattagatgaagagagg
caagggacttctgctttgaccagtgctttaaatttgtcaaattcccctacaccatcaacc
tcggaatgcaccagtgacttggaaatggcaacgacaccacgaattgttgaaaatattcaa
gacagtgaacaagtttcaagtaagactgagctgacctgctccagtttcaatggattacct
ggttgcaatggactttcagctggtgaatttactgtaaatattatttcttcggaaagttca
gaaagacttaatacatcctgcactgaggaggacttcaaaagtagggacatttctgatagc
ttgcaggcagtcaacgaagtagtttcttgtagtaatgtcaatgtagtgggagttgacatt
tgtagttatggtggagacataaagccgattggttctttgttatttactggtggacatgta
tttcaagacttagaaactgttgcaaataatcttgaagcttgtagcaattattcacaatct
ttctctgagacaagtacacccaatggacctgttttagatgccaaacccatctcgctgcct
cctaaaagcagtatttttgtttctagcaatgctcctcctcatggaattccctgtgtagca
gcaacacctaaagttgtacgagggaatcggaagcgttctcgatccgagagcgacagtgaa
aaaattcaacccttacccatttccagcattatacacggtccaccgttaggggctgctgca
cctgttcctgccaaacgagagaccaagttgtccactgaaactgtagtcacaatgccaaat
ggaggcacactaaaagtgggcaaatccttgcttgcggccagtaaaagtgttaaaaagcac
gcagaacatggagcaaaaaaatcacactctaaagtaaagcagggaacaaccaaatctaaa
agtaaggagaaagttcatagcagtactgttatgcctggtagcccatcaaaaatagcatac
aaaaagccccaagagaagaaggggtgtaagtgtggacgtgctacacaaaacccaagtgtt
cttacttgtcgtgggcaacgttgcccttgttactcaaatcgcaaggcctgtttagactgc
atttgccgtggttgccagaattcctacatggccaatggcgagaaaaaattggaggctttt
gctgtgccagaaaaggctttggagcagaccaggcttactgtgggcatcagcctaaccagc
atcagcaatgcggtgcggaacgcaagcacgagtgcaagtgtcatcaatgtgacaacgggg
tcgcccataccaactttcctagctgccagtccacatgacgacaaaagcttggatgaaact
attgactatagatatgactgttag
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