Rhincodon typus (whale shark): 109934681
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Entry
109934681 CDS
T06055
Symbol
mdm2
Name
(RefSeq) E3 ubiquitin-protein ligase Mdm2
KO
K06643
E3 ubiquitin-protein ligase Mdm2 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04068
FoxO signaling pathway
rtp04110
Cell cycle
rtp04115
p53 signaling pathway
rtp04120
Ubiquitin mediated proteolysis
rtp04144
Endocytosis
rtp04218
Cellular senescence
rtp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109934681 (mdm2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
109934681 (mdm2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109934681 (mdm2)
09143 Cell growth and death
04110 Cell cycle
109934681 (mdm2)
04115 p53 signaling pathway
109934681 (mdm2)
04218 Cellular senescence
109934681 (mdm2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109934681 (mdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109934681 (mdm2)
04121 Ubiquitin system [BR:
rtp04121
]
109934681 (mdm2)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109934681 (mdm2)
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
109934681 (mdm2)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
MDM2/MDM4 proteins
109934681 (mdm2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
SWIB
Zn_ribbon_RanBP
zf-RING_2
DUF4749
Motif
Other DBs
NCBI-GeneID:
109934681
NCBI-ProteinID:
XP_048463381
LinkDB
All DBs
Position
18:54268316..54381502
Genome browser
AA seq
462 aa
AA seq
DB search
MATNGSAPCLGTSQDDQVLQADQDCQVKPKPLLLKLLHFAGARSETFTIKEVMHYLGQYI
MAKQLYDERQQHIVHCSDDLLSHLFGVQSFSIKEPRTLYAMLSKNLISVGHEDSINDLNL
GKITNQLGGEDCLVTVIPNDGNACTSCNVSCSPAAGRRSNCSDSDNDASPDEQFRTRRRK
RHRSDSISLHWDDLSLCLISKLRREHGNSESSDSPSHLDIHIGTEGEDSSDKFSVEFEVE
SVHSEDYSDFSEDSQDQSDKEIYEVAIFEAADSDESTFVEEIDPEISEADYWKCSRCEEL
NPPLPRHCHRCWSVRQDWLPDKPKLQHFDKMQDEGIDVPDCKKPPLESKKSNCSDLISEV
SQCSESQETECSEPSTSGSFNCCSQEIEKESTGKGEKGELSPVGPLEACVICQARPKNGC
IVHGRTGHLLACYTCARKLKKRNKPCPLCREPIQLVVLTYFS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaacggatcggcaccctgcctcgggacttcacaagatgatcaagtactacag
gcagatcaggactgtcaagtgaaacccaagccactcttacttaagttgttgcactttgct
ggagcacgaagtgaaaccttcacaataaaggaggtaatgcactacttgggacagtacata
atggctaagcagttgtatgatgaaagacagcaacatatagtacattgttctgatgatctg
ctgagtcacttgtttggagtgcagagcttttcaattaaagagccacgaacattatatgcc
atgctgtcaaagaatttgatatcggtgggccacgaagattctataaatgatctcaatctt
ggaaagattaccaaccagcttgggggtgaagattgtctcgtgacagtgattccaaatgat
gggaatgcttgcacatcatgcaatgtttcctgttctcctgctgcaggcagaagatccaat
tgcagtgactctgataacgatgcctcacctgatgagcagtttcgtactagacgacgaaag
cggcatcgatctgatagcatttccctccattgggatgatctgtctttgtgtctgataagc
aagttgcgtcgtgagcatggaaacagtgaatcgtctgattctcccagccatctggatatt
catattggtacagaaggtgaagattccagcgataagtttagtgttgagtttgaagttgaa
tcagttcactctgaagattatagtgatttcagtgaggattcacaagaccaaagtgacaaa
gagatttatgaagttgccatttttgaagctgctgacagtgatgagagcacttttgttgaa
gaaattgatccagaaatatctgaagctgattattggaaatgttccagatgtgaagagctg
aatcctccattgccacgccattgtcatcgatgctggtctgtgcgccaagattggcttcct
gataaacctaaacttcagcattttgacaagatgcaggatgaaggtattgatgttcctgat
tgcaagaaaccaccacttgagtcaaagaaatcaaactgttcggatttaatcagtgaggtc
tctcaatgctcagagtcacaagaaactgagtgctcggaaccttctacttctggtagcttc
aactgctgcagccaggaaattgaaaaagaaagtacaggcaagggagagaaaggcgagtta
agccctgtgggacctctggaggcttgtgttatatgtcaggcacgaccaaagaatggttgc
attgttcatggtaggactggccatcttctcgcttgttacacttgtgcaaggaaactgaaa
aaaagaaacaaaccatgtccgttgtgcagagagccaatccaactggttgtattgacctac
ttcagttaa
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