Rhincodon typus (whale shark): 109934963
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Entry
109934963 CDS
T06055
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109934963
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109934963
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109934963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3_DZIP3_dom
WHD_TTC3
TTC3
TPR_1
TPR_2
TPR_BSK1_C
TPR_11
TPR_12
TPR_16
CARD
TPR_17
TPR_8
TPR_9
Motif
Other DBs
NCBI-GeneID:
109934963
NCBI-ProteinID:
XP_048458872
LinkDB
All DBs
Position
11:15974584..16062820
Genome browser
AA seq
1452 aa
AA seq
DB search
MDDSSSDSDDSKLIVHHQSRFMSEAISEKYCQIKPKNNMEAAHIWCSVIPVNDQMHWHII
AIHLLWPYLFAQAKKIDRYLQWAFIAKFIDAENYDVFEMNVVKLQNIELLETVIEAIGKH
HHSTAFLPCLLDLWDKVHKINCDLDGVIDMIEKTGEFNSLRGEVNSGTKRSRMSAIAIIC
FQYAYFVKMILGGENILNLVPKEDDQKSEEYRKRGNEEFKNENYEAAVSWYSKAIDLRPD
NHILYGNRALCFSRIENYGKALGDGKRAIVLKPNWPKGHYRLCDALFSMGEHKRAIDANA
KAQELCKDVSDGIRDLIQQKEKFLKKRDENHGRSKTDGLKEEVNTKREQSKVPTKLVFES
HKNESKRSQERNGMRSRLPQHPEKPLMPVNDSNSMINELKSLIHDGYIALLDKRAHNAKH
AFLKILNLVDPEKLEEASLSRSEYVIIIYGHASALLGIGLPEELTEAENQFNKILEQFPQ
QRLDCLAFYGLGKVYFRQNRFADALDPFTKSLTMVNRKIVPGILTWPTTTVVIEETQAEK
LKAMLEEYIEKCRFPPVPDATCRYQHCQGHSKVQIYFTDPDFKGFIQVMCCLQCCVEYHI
NCWKKLKAASFEDKNDKEFLRSQCFTPDCGGQISKIVIYNSKGLVKCEFEAKITKSKDPA
KTVVKQKCSSALKLKIKEGRKQTRKQLKKEASRHNAEKQIKEKSEKNSRKDETNSKAGHS
WNPLGDRMLQLITENKEQLKAGVQNVSSLLQELLSFHVLSEQDFDMLHTGASKPCQVMGQ
LLDLIVQKNNRIKTREFLYTLSKCQDVDNKLLDWINWLNDAGREAAELFLSHYSNCIEQL
DLNSVQELLDASKIDLSPSDSTKEIVEQLKQESPTKIRSFIWKLEEKREQFPSLHIPLDE
YFNAMDAPCTVLKKQENEELSNIGLRSKVRNRKKKPKDSKPFLLLSGSIRAGAREEDDDE
IFSDDGILTQMTSAGPFMVPEYLRVRLEDFEDSYDPQLYGSHYQRVLDNNPDPTRESLYD
YFAQILNEHGPMEIDNQMLVGEFENFPPEAQELVRKTGGLKSFLMESLRFVVINNLIGLM
KHAVQLKSLAISEKAATRGTEESEINSDEVSNESLRPVAHLNPTAKEFKPVSFHQSSLSV
TSSLSEIQNPNQHIHYDTEVGINLSTDNVYMNINPYSDVRPDIHGSDMSLLNHNLKTSNP
LTDHYLNAIAPASQSSFNPTFCSDVSSSHIPSDIPQVIPNFSNLSFTNYNYQFHSVNSGG
GCNPMANEMGHVRLSSCVNTTVMGELEEMPQSDFKHKDTNGVSSKMSSKESDTSCNKCEN
KRGPLLRTIAVQARQESFCNTNINTDPLQPFENQQGDILRIEKEHHVLQKQLQEAEEKYD
QLANRSRDEITALEEKMTEFIKRNELLKSELDLIRQDLESEIKKSQQEKRENNENLKILK
SKVKSLADLNQM
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggatgattccagctcagactcggatgacagtaagctgatcgtccatcatcaaagtaga
tttatgagtgaagcaatatctgaaaaatattgtcaaattaagccaaaaaataatatggaa
gctgctcacatttggtgctctgtcattccagtaaatgatcagatgcattggcatataata
gccatacacttactatggccatatttatttgctcaggcaaaaaagattgatcgctatcta
cagtgggcctttatagcgaaattcatagatgctgagaattatgatgtctttgaaatgaat
gtggtaaagctacaaaatattgagcttctggaaacagtgattgaggcaatagggaaacat
caccattctacagcatttctaccctgtttattagatttatgggataaagtgcataagatt
aattgtgacctcgatggtgtcattgatatgatagaaaagacaggagaatttaatagtctg
cgtggtgaagtgaactctggaacaaaacgatcacggatgtcagctattgcgattatctgc
tttcagtatgcatattttgtgaagatgatcttaggtggtgaaaatattcttaatttagtg
ccaaaagaagacgatcagaagagtgaagaatatagaaaaagaggcaatgaagaatttaaa
aatgaaaactatgaagctgcagtaagctggtactccaaggcaattgatttaaggcctgac
aatcatattctatatggaaaccgagctctctgcttttcacgaattgaaaattacgggaaa
gcacttggtgatggaaaacgagccattgtattgaaacctaattggcccaagggtcattat
cgtctgtgtgatgccttgttttcgatgggagagcacaaacgagccattgatgctaatgct
aaagctcaggagttatgcaaagatgtttcagatggaattcgggatttaattcagcagaaa
gaaaagttccttaaaaagcgagatgaaaatcacggaagatcaaagactgatggattaaaa
gaagaagtaaacaccaaaagagagcagtcaaaggtaccgactaagctagtatttgaaagc
cacaagaatgagtccaagagaagtcaggaaagaaatggaatgagatcacgtcttccacaa
cacccagaaaagccgctgatgcctgtaaatgactcaaacagcatgattaacgaattgaag
tctctaattcatgacgggtatatagccttattggacaagcgtgcccacaatgcaaaacat
gccttcttaaagattctgaacctagtggatcctgaaaaactagaggaagcatctttgtcc
agaagtgaatatgtgataattatctatggtcatgcctctgccctccttggcattggattg
cctgaggagctgactgaggctgaaaatcaatttaataaaatcttggagcagttcccacag
cagcggcttgactgtttggcattttatggacttggcaaagtgtacttccggcagaacaga
tttgctgatgctttagatcctttcactaaatccttaacaatggtaaaccgtaagattgtt
ccaggcatactaacatggcccacaacaaccgttgttattgaagaaacacaggctgaaaaa
ttaaaggccatgttggaagaatacattgagaaatgcagatttcctccagtacctgatgca
acctgccgctatcaacattgccagggacattctaaggtccagatctacttcacagaccca
gattttaagggctttattcaagtaatgtgctgcctacaatgttgtgtggaatatcatatc
aactgttggaagaaattgaaggcagcttcctttgaagataaaaatgacaaggaatttctc
agaagtcaatgtttcacacctgactgtggaggacagatttcaaaaattgtcatctataat
tcaaaaggtcttgtgaaatgcgagtttgaggctaaaataactaaaagcaaagacccagca
aaaacagttgtgaaacagaaatgttcaagtgcattgaaattgaaaattaaagaaggtcgt
aaacaaaccagaaaacagttgaaaaaagaagcttcaaggcacaatgctgaaaaacagata
aaagaaaagtctgaaaaaaatagcagaaaggacgaaaccaattctaaagcaggtcattca
tggaatcctcttggtgatcgaatgttgcagttgataactgagaacaaggaacagttaaaa
gctggagtgcagaatgtttcaagcctacttcaagaactgctttcatttcatgttctaagt
gaacaggattttgacatgcttcacacaggtgcctccaaaccatgtcaggttatgggtcaa
cttcttgacctcattgtacagaagaataacagaataaagaccagggaattcctctacaca
cttagcaagtgccaagacgttgacaacaagctgttagattggatcaattggttaaatgat
gcaggccgtgaagcagcagagctatttctgtctcattattcaaattgcatagagcagttg
gacttgaactctgtacaagagttgctggatgcatcaaagattgatctctcaccctctgat
agcactaaagaaattgtagaacagttgaaacaggaatcgcctacaaaaatccgcagtttt
atatggaagttggaggaaaaaagagaacaatttccatccctacacattcctttagatgaa
tattttaatgcaatggatgctccttgtactgtactaaagaaacaggaaaatgaagaatta
tctaatattggccttagaagtaaagttagaaacagaaaaaagaaaccgaaggattccaag
ccttttctccttctgtctgggtcaatcagagctggagcccgtgaggaggatgatgatgaa
atattctccgatgatggcatccttacacaaatgacctctgcaggtccatttatggtacca
gaatatcttcgtgttcggcttgaggattttgaagatagttatgatcctcaactatatggc
agtcattaccagcgggtcctagacaataacccagacccaacacgcgaaagcctgtatgat
tacttcgcccaaattctgaatgaacatggtccaatggaaattgataaccagatgttagtt
ggcgaatttgaaaacttcccgccagaggcccaagagctagtgcgaaagacgggtggcttg
aaatcatttcttatggaatcactgcgatttgtggtgattaacaatttgataggactgatg
aagcatgctgtacaattgaagagcttggctataagtgaaaaagcagcaaccagaggcact
gaagaatccgagattaactcagatgaagtttctaatgaaagcttacgtccagtggctcat
ctcaatcccactgctaaggaatttaagcctgtgtcttttcatcaatcatctttatcagtt
acaagttcactaagtgaaatacaaaaccctaatcagcatatacattatgatactgaagta
ggaattaatctttcaacagataatgtgtatatgaatattaatccgtattctgatgtaaga
ccagatattcatggctcagacatgagcttattgaatcataatttgaagactagcaatccg
ttgaccgatcattacttaaatgcgattgctcctgcctctcaatcttcttttaatccaacg
ttctgcagtgatgtatcatctagtcatataccttctgatataccacaagtaatcccgaat
ttttcaaatctatcttttactaattataattatcagtttcattctgtcaattctggtgga
ggatgtaaccccatggcaaatgaaatgggacatgtgagactgtcatcttgtgttaataca
acagtaatgggtgaacttgaagaaatgcctcagagcgattttaagcacaaagatactaat
ggtgtatcaagcaaaatgagcagcaaggagtctgatacaagttgcaataagtgtgagaat
aaaagaggtccattgctaaggaccattgccgtacaggctcgtcaggaatctttctgtaat
accaacatcaatactgatcctttacaaccttttgaaaatcaacagggtgatattttgaga
attgagaaggagcaccatgttctgcagaaacaactgcaagaagcagaagaaaaatatgat
cagcttgcaaaccgcagcagagatgaaattactgcacttgaagaaaaaatgactgaattc
ataaagagaaatgagctactaaaatctgagcttgacttgatacgccaagacttggaaagt
gaaatcaagaagagtcagcaagaaaagcgagaaaataatgaaaacttaaaaatactgaaa
tcaaaagttaaatcacttgctgatttgaatcaaatgtaa
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