Rhincodon typus (whale shark): 109935441
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Entry
109935441 CDS
T06055
Symbol
irg1l
Name
(RefSeq) immunoresponsive gene 1, like
KO
K17724
aconitate decarboxylase [EC:
4.1.1.6
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00660
C5-Branched dibasic acid metabolism
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
109935441 (irg1l)
Enzymes [BR:
rtp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.6 cis-aconitate decarboxylase
109935441 (irg1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MmgE_PrpD_N
MmgE_PrpD_C
Motif
Other DBs
NCBI-GeneID:
109935441
NCBI-ProteinID:
XP_020389663
LinkDB
All DBs
Position
14:42686912..42692838
Genome browser
AA seq
493 aa
AA seq
DB search
MFSKLLKFQPSLTTGKRLYHKISREAFEAPDLKETVTSSFGSFISGVEVDHLSETVLQRS
KRMILDNIGVGLLGSTSPVFDICLNYCQQMYAQDPVSSVYGRKGLRLSPTLAAFANGVAA
HSMDFDDTWHPATHPSGAVLPALLAAAQMLPTNSKPTGLDFLLAFNVGIEVQGRLMHFSQ
EANNIPKRFHPPSVVGTMGSAAAIAKFLSLNANQCVNALAIAASLSGAPMANAATQAKPI
HIGNATRLGFEAALLASKGMEGNVKILDKTLGCFGFSAFYGDYEPQKIAPLEQTRFLLED
QDIAFKRFPAHLGMHWIVDAAVSVRQLATANDGAFSPSMIDRIILRIPVSRYINRPFPET
EHEARHSFQFNACSALLDGEVNIESFSENKLQRDSLNELLNKVELQHPEDNVASFEKMYG
EVVLLLRNRDVLRGRCDTFYGHWRNPLSKEALLDKFKSNASYVLQQNKIEAIINTVENLE
EVRDSSTLTSYLQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaaactgctgaaatttcagcccagcttaacaactggaaaacgcctgtaccat
aaaatttctcgcgaagctttcgaggcgccggatttgaaagagacggtgacgagcagtttt
ggctcatttatctcgggtgttgaagttgatcatctctcggagacggttttacagaggagc
aaacgcatgatcctggacaacattggagtcggactcctgggcagcaccagcccggtgttt
gatatttgtcttaattactgccagcaaatgtacgctcaagacccagtcagctcagtgtac
ggacgcaaaggattaagactttcgccgactctggccgctttcgccaatggagtcgcggca
cattcaatggattttgatgatacctggcaccctgccacccacccgtctggagctgtactt
cccgccctcctggctgctgcccaaatgttacctacaaactccaaacccactggactcgac
ttcctcttggcttttaatgtgggcattgaagttcagggcaggttaatgcacttctcgcaa
gaggcgaacaacatccccaagagatttcaccctcccagtgtggttgggacaatgggcagt
gctgcagcgatagccaaattcctttcacttaatgccaatcaatgtgttaatgccctggct
attgcagcttcactctcaggggcaccaatggccaatgcagccactcaggcaaaacccatc
catattggcaatgccacacggctgggctttgaggcagctcttcttgcttctaaaggaatg
gaaggaaatgtgaaaattctcgacaagacacttggctgctttggattttccgctttttat
ggtgactacgaacctcagaagattgctccacttgaacagacacgatttctgcttgaggac
caagatattgcatttaagcgcttccctgctcatctgggtatgcactggatagtagatgct
gctgtctcagttaggcagttggcaactgctaatgatggtgccttttcaccctctatgatt
gacagaataattctgcgtatccctgtttcccgttacatcaacagaccattcccagaaaca
gaacatgaggcccgccattccttccagtttaatgcctgctctgcattgttggatggtgaa
gtgaacattgaatcattcagtgaaaataaactccaacgagatagtctcaatgagttactt
aacaaagtggagcttcaacatcctgaagataatgtggccagttttgagaagatgtacgga
gaagtagttctcctcctgaggaatagagatgtgctcaggggaagatgtgacaccttctat
ggacactggagaaacccactgtctaaagaagcactactcgacaaattcaaaagtaatgct
tcctatgtattgcagcaaaacaagatcgaagctattatcaacacagttgagaaccttgaa
gaagtgagggatagttccacgttaacctcttatttgcagtga
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